Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01631 ATGAAGTGTTTCTATTTCTCCAATGGAGAGAAGAAGGACGAAGAACGAAAGAACTCAAAGTCCATGTCGGTTCGCTCCTCCACTTCTACATCGACCGATCGTGCGGTGAAGAGATCTGGGTCTGAATTAACTTCTCAAAATGTCTCGGACATGAGCGCAGAATCCATGGAGCGGACTTCGTTTCCGAGTATGTCTCAGAAACCCAGCAATCTCAGAGTGTTCACATTCTCAGAGCTGAAGTCAGCCACAAAGAATTTCAGCCGCTCCCTCATGATCGGGGAGGGTGGGTTTGGGTGTGTTTACAAGGGTATGATCAGGAGCCCAGAAGATCCACTTACCAAACTCGACATTGCTGTTAAACAGCTGGGCAAAAGAGGATTGCAGGGGCACAAAGAATGGGTGACAGAAGTAAATGTCCTTGGGGTGGCTGAACATCCAAACCTTGTAAAACTCGTGGGCTATTGTGCCGAGGATGATGAAAGAGGAATCCAGCGGCTTCTGATTTATGAATACATGCCCAACAGAAGCGTGGAAGACCATTTGTCAACTAAGTTATCCACACCTCTCCCATGGGCCATGAGACTGAGAATAGCCCAGGATGCTGCTCGTGGCTTAGCATACCTCCACGAAGAAATGGATTTTCAGATTATCTTCAGAGATTTTAAATCTTCAAACATTCTTCTGGATGACAAATGGAATGCAAAGCTGTCGGACTTTGGACTGGCCAGGCTGGGCCCATCGGAAGGATTAAGTCATGTCACAACAGCGGTTGTGGGAACCATCGGGTATGCAGCTCCTGAATATGTCAACACTGGCCGCCTCACAAACAAGAGCGATGTGTGGAGCTATGGGGTTTTTCTCTATGAACTCATCACAGGCAGGCGCCCATTAGACCGGAACCGCCCCAAGAGTGAACAGAGGCTCTTGGAATGGATTAGGCCTTACCTATCAGATATTAAGAAATTCCGACTGATCTTGGACCCAAGGCTTGAGGGGAAGTACTCCCTCAAGTCTGCCCAGAGGCTCTCAGCTGTTGCCAACCGGTGCTTGGTGCGGAATCCAAAGGCACGCCCCAAGATGAGTGAGGTGTTGGAGATGGTGAAGAAGATTGTGGACGCAACAGAAATGGGGAGCCCTCAACTCCTCATGAAGAGTCTGGATCAAACAAATGCTTCCGAAGAAGCCACAAGAAAAGAGTCCAACTTGAAGAGAAGGATTGTGGATCCTAGAATTGCAGAAAGTGGGTGGTTGGTTTGGCGAAGCTGGACACCGAAGCTCGTAAGGACTTGCTAA 1293 0.4865 MKCFYFSNGEKKDEERKNSKSMSVRSSTSTSTDRAVKRSGSELTSQNVSDMSAESMERTSFPSMSQKPSNLRVFTFSELKSATKNFSRSLMIGEGGFGCVYKGMIRSPEDPLTKLDIAVKQLGKRGLQGHKEWVTEVNVLGVAEHPNLVKLVGYCAEDDERGIQRLLIYEYMPNRSVEDHLSTKLSTPLPWAMRLRIAQDAARGLAYLHEEMDFQIIFRDFKSSNILLDDKWNAKLSDFGLARLGPSEGLSHVTTAVVGTIGYAAPEYVNTGRLTNKSDVWSYGVFLYELITGRRPLDRNRPKSEQRLLEWIRPYLSDIKKFRLILDPRLEGKYSLKSAQRLSAVANRCLVRNPKARPKMSEVLEMVKKIVDATEMGSPQLLMKSLDQTNASEEATRKESNLKRRIVDPRIAESGWLVWRSWTPKLVRTC* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01631 430 CDD STKc_IRAK 92 370 - -
Eupl05g01631 430 FunFam Serine/threonine-protein kinase PCRK2 172 380 - -
Eupl05g01631 430 Gene3D Transferase(Phosphotransferase) domain 1 172 391 - -
Eupl05g01631 430 PANTHER OS01G0588500 PROTEIN-RELATED 30 370 - -
Eupl05g01631 430 ProSiteProfiles Protein kinase domain profile. 86 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01631 430 MobiDBLite consensus disorder prediction 1 66 - -
Eupl05g01631 430 Gene3D Phosphorylase Kinase; domain 1 55 171 - -
Eupl05g01631 430 Pfam Protein kinase domain 91 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01631 430 MobiDBLite consensus disorder prediction 1 21 - -
Eupl05g01631 430 SUPERFAMILY Protein kinase-like (PK-like) 59 367 IPR011009 -
Eupl05g01631 430 MobiDBLite consensus disorder prediction 22 66 - -
Eupl05g01631 430 FunFam Serine/threonine-protein kinase BIK1 52 171 - -
Eupl05g01631 430 ProSitePatterns Protein kinases ATP-binding region signature. 92 120 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01631 Eupl-Chr5 40312209 40329556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01631 1 364 Glycoside Hydrolase AT3G07070 45.355 2.39e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl05g01631 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01631 - - nnu:104586354 684.485