Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01624 ATGAAAAGCAATGCAATAGAGCCAATTTTAACACCTCGAAGCTCTCGAACCAGAAGCGCGAATTGTAAAGCTGTTTCGAGCTACAGAGACACTACAATGACTTCGATTTCAACCAAAACCTCTCTCTCCTCATTCCGAGACCTTTTACCTGAAAACCCTCACATCTATGATTTCTCAGAAATCTGCTCCGCCACCAGCAATCTCACCAACCGCTCCTCCTCCTCCTCCTCTGCTTGTTGGCGCTGCTCCATCCGCGGCAAAGACGTCATCGTTTTCCAACGCAAGTTCCGCCGTTCGATCAAAACATCACAACTCCGCGAACAGCTATCCTTGATCTGCAGGATCCACCACATCAGCTTGATCAAGCTCCTTGGCGCTTCAGTCTCTGGCGACAACGTCTACCTCGTCTACGACTTCGTGAACGGCACCAACCTTGCGGATTGCCTCCGAAACCCTAAAAACCCTAACTTTACAGTCCTTTCCACATGGATGTCAAGAATACAGATCGCTACAGATCTCGCACAGGGACTCCAGTACGTTCACCACTTCACTGGGCTGAATCTCTATTTGGTCCACAACTACATCAAGAGCACAAGCGTGATCGTCACTGAACCTTCGTTCAATGCGAAGATCTGCCATTTTGGAACCTCAGAACTCTGCGGAGAGATCGTCACCGGAGATCATTGTCAGAACAACCAAGAGATCACAGAGGCCTCTCATGATTCTCCGTTATTAAAAATGAGAATATCGGACGACAGCCGGATCATGAAATTCCAAGGAACAAGAGGCTACATGTCGCCCGAATTTCACTCCGATGGGATGGCAACACAGAAATCCGATGTGTTCGCGTTCGGGGTTGTGATCTTGGAGCTCTTGTCAGGAGAAGAACCTCTAAAGTACATATATGACACGGAGAAGGGCAATTACAGGAGAGTGTCTGTGATCGAGACAGCGAGAGAAGCGATTGAGTCCGAAGAAACAGGGAGACTGCGAAGGTGGGTGGATAGGAGGTTGAAGGATTCGTTCCCGATGGAGGTGGCCGAGAAGATGACACGTGTAGCACTGGCATGCGTACAAGTGGATCCAGGAAAGAGGCCCGACATGCGCCGCGTGGCAGGGAAGATTTCGAAGCTTTATTTGGAATCAAAGATCTGGTCGGAGAAGATGACAGTCCCGAATGACTTCACAGTCTCAATGGTCCCTCGTTAA 1209 0.493 MKSNAIEPILTPRSSRTRSANCKAVSSYRDTTMTSISTKTSLSSFRDLLPENPHIYDFSEICSATSNLTNRSSSSSSACWRCSIRGKDVIVFQRKFRRSIKTSQLREQLSLICRIHHISLIKLLGASVSGDNVYLVYDFVNGTNLADCLRNPKNPNFTVLSTWMSRIQIATDLAQGLQYVHHFTGLNLYLVHNYIKSTSVIVTEPSFNAKICHFGTSELCGEIVTGDHCQNNQEITEASHDSPLLKMRISDDSRIMKFQGTRGYMSPEFHSDGMATQKSDVFAFGVVILELLSGEEPLKYIYDTEKGNYRRVSVIETAREAIESEETGRLRRWVDRRLKDSFPMEVAEKMTRVALACVQVDPGKRPDMRRVAGKISKLYLESKIWSEKMTVPNDFTVSMVPR* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01624 402 SUPERFAMILY Protein kinase-like (PK-like) 79 373 IPR011009 -
Eupl05g01624 402 Gene3D Phosphorylase Kinase; domain 1 27 139 - -
Eupl05g01624 402 Pfam Protein kinase domain 97 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01624 402 ProSiteProfiles Protein kinase domain profile. 65 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01624 402 Gene3D Transferase(Phosphotransferase) domain 1 141 394 - -
Eupl05g01624 402 PANTHER OS09G0572100 PROTEIN 15 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01624 Eupl-Chr5 40197466 40199062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01624 51 390 Receptor kinase-like Gene Family AT1G51940 30.659 2.70e-43 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Eupl05g01624 Pkinase 5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01624 - - nnu:104601288 513.842