Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01618 ATGTCCGAGAAATTTGAGCCCGGATGTTTGTACCCGACAACTACAAGCTTAGAGAATTCACTAGGGATGAGCAGTTTTAGGCCTGAATCGCATGTTGCGCAGCAAAGTCGCCGCGATAAGCTGAGAGTTCCGGCAAGTGTTATGCCAACGCACCATATGCAAGATTTCCCAAATCATTTAGTACAGTTACCCAGAGATTCGGGCCTGAACCCAGGTCTGGTTCAAGTTCGGAGCATTAGGAACTGTGATTTGCTTTACGACCCGACAATGCTTTCATCGGAAATGCTTAATTTTTCAACAAATACCCAGGTTTTGTTAGCTCACAAGGATGCTGTCTTGCATCAAGAATCGGGTGCCGATCAATCTGGTAGGCCTGTAGGGTCCGATGATGCATCATTCGCTAATTCTTCTCACTCAGTTCCATCTGACTTTATGCCTTCTACTAAAGTTAGTGATCCGCAAAACCCTTGCTATTGGAAAGGAATTGGGCCACAGCAAAGCTGTGATTGGATTGTGAATTATGTGAATGGATCAGGAGGTACTGCTAGCAATCAGAGCCCCTTATTTGCTGGGAGAATCTTACCTACTGTGAAGGAAGCCAATCTTTCTGCATCCTCACTGTATTTGAAGCCTGGTTGCAATGGGTACCAGAATGTAAATTCTTCAATGACTACCCCAGCTGGTGAAATCTCAAGTCAGGATGGCCATAAGCAATATGGGGAAATGCACTTTAGTTCTCCGTCGTTTTACCAAAATACTCTTCAAGAAGTTGTGACCTCTTCCACCATGGGAAGCCAAGGATTCGAAATGGCTTCACTTGTACAGCAAAACATTAGGGAGACTGGTCATGGTTCATGGGTAGATGGTGGAAATGAGCTTCTTCTTCTTCCTTCATATGGAAATCAGACTAATGCTTCGCGGCTTAATAATGCTGCTGCTTGGACGCATAGGCCGGTGGAGAGTAGTCATCACTGGAATGATGAATTGGGTTTTGCGACAAATAAGAGTGAAGGAAACTTTGGTAGTATTGCGGGTGATTTTACAGCACAGGGCCTATCTCTATCTCTTTCTTCAAACCCGCCTTCTGAATTACATGTACCTCAGTTTGGAGAAAGATTTGGGTCTGAAAATTTGCAATCTCGGACGGGCATTTGCAGTGGTTCTCAAGATTCGAAGACTAATAATTCTGGTTATATATGTTCAAATTCAAAATCGTCAATTAGTAATAAAGGTTGTGGAAACTCCATTCAAGGTATTGTGGGCTCTTCTACCTATCCTCATCGAAGTACAGGTCCTCTTGGGCCCTTTACTGGGTATGCAACAATATTAAAGAACTCAAAGTTCTTGAAGCCTGCCCAGCATCTTTTGGATGAATTTTGCAGTGTAACTGGCCCAAGTCTCATCAAAACACGTGAGATGTCTGAGAGGGGTACTGGAGATGTAAGCATTTCGTCTGATCCCATGAATGTTGAAAATGAGGTTGGTGGGAGGGGTGGGAACTCAGGTATATCATCTTCTTCATTTTACAGTTCTAATGAAGCTGGTGGTGAAGGTGGAGTTGGGAGTGGATCTTCTCAATCCTATTGCCCCGAGTTCCAACAGAAGAAGGCAAAGCTCTTGTATATGCAGGAGGAGGTTTGCAGAAGATACAAACAGTACCACCAGCAGATGCAAATGGTGGTTTCATCCTTTGAATCAGTAGCAGGTCTCAGTGCCGCCACCCCCTACACCTCATTGGCTTTGAAGACCATCTCAAGGCACTTCCGGTGCCTGAAGAACGCCATCTCAGACCAGCTTCAGCATATAAGCAAGGCATTGGGGGAGGATTTGTTGTCCCCCACCGCTGGTACGAGTAGTAGTAAAGATGATCCAACAACTTCGAAGGTAAGGTTCCTTAGTCAGAGCCTTCGGAAACAGAAGACTGGTGGGGACAGTCTATGCTTCCTTGAACCCCAGCAACACGTCTGGAGACCCCAGAGAGGCCTTCCAGAACGTTCGGTTGCTGTTCTGAGAGCCTGGTTGTTTGAGCATTTCCTTCACCCGTATCCGACTGATGCAGATAAGCATATGCTAGCTACTCAAACAGGTCTATCTCGAAACCAGGTATCAAACTGGTTCATCAATGCCCGAGTCCGAGTATGGAAGCCCATGGTTGAGGAGATACACATGCTTGAAACTAAAGGGTCGACAGAAATGGACATAAATTCAGGGAAGAACAGTCCAATGCCCGATGCCGACAGTAGCGTTGGGCACACTGGCAATCATTCACCTCGCAAGCTCATGATCGATGCGATGTCGGAAAAGCAATCAGAATGCTCCACAGTGGAGCCCACACCGAATATCGAAATCGGAAGGAATTCAGAACAATGGCATCAGGAGAAGCGGTCTAGAGGGGATTGTCAGATTACAGCAGGCATGGATGGGGGGTTGATGGGGTTTGTTCCGTACCACCAGAGCGGGCTTGAGATTGGGGGACTAGGAGCTGTGTCGCTTACATTAGGACTAAGAAACAGCGCCGAGAGTGCACAACAACCTCAGCAACAACAACAGCAGGAGCATCAGCTAAGCGGGCATTATGGAGGTCAGATGGTTCATGATTTTGTTGGGTGA 2610 0.4632 MSEKFEPGCLYPTTTSLENSLGMSSFRPESHVAQQSRRDKLRVPASVMPTHHMQDFPNHLVQLPRDSGLNPGLVQVRSIRNCDLLYDPTMLSSEMLNFSTNTQVLLAHKDAVLHQESGADQSGRPVGSDDASFANSSHSVPSDFMPSTKVSDPQNPCYWKGIGPQQSCDWIVNYVNGSGGTASNQSPLFAGRILPTVKEANLSASSLYLKPGCNGYQNVNSSMTTPAGEISSQDGHKQYGEMHFSSPSFYQNTLQEVVTSSTMGSQGFEMASLVQQNIRETGHGSWVDGGNELLLLPSYGNQTNASRLNNAAAWTHRPVESSHHWNDELGFATNKSEGNFGSIAGDFTAQGLSLSLSSNPPSELHVPQFGERFGSENLQSRTGICSGSQDSKTNNSGYICSNSKSSISNKGCGNSIQGIVGSSTYPHRSTGPLGPFTGYATILKNSKFLKPAQHLLDEFCSVTGPSLIKTREMSERGTGDVSISSDPMNVENEVGGRGGNSGISSSSFYSSNEAGGEGGVGSGSSQSYCPEFQQKKAKLLYMQEEVCRRYKQYHQQMQMVVSSFESVAGLSAATPYTSLALKTISRHFRCLKNAISDQLQHISKALGEDLLSPTAGTSSSKDDPTTSKVRFLSQSLRKQKTGGDSLCFLEPQQHVWRPQRGLPERSVAVLRAWLFEHFLHPYPTDADKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGSTEMDINSGKNSPMPDADSSVGHTGNHSPRKLMIDAMSEKQSECSTVEPTPNIEIGRNSEQWHQEKRSRGDCQITAGMDGGLMGFVPYHQSGLEIGGLGAVSLTLGLRNSAESAQQPQQQQQQEHQLSGHYGGQMVHDFVG* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01618 869 CDD homeodomain 656 717 IPR001356 GO:0003677
Eupl05g01618 869 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 311 745 - -
Eupl05g01618 869 Pfam Homeobox KN domain 673 712 IPR008422 GO:0003677|GO:0006355
Eupl05g01618 869 SMART HOX_1 656 720 IPR001356 GO:0003677
Eupl05g01618 869 FunFam BEL1-like homeodomain protein 9 659 721 - -
Eupl05g01618 869 MobiDBLite consensus disorder prediction 472 526 - -
Eupl05g01618 869 SMART prehox3 437 597 IPR006563 -
Eupl05g01618 869 Gene3D - 659 721 - -
Eupl05g01618 869 MobiDBLite consensus disorder prediction 498 526 - -
Eupl05g01618 869 MobiDBLite consensus disorder prediction 128 147 - -
Eupl05g01618 869 Pfam Associated with HOX 442 596 IPR006563 -
Eupl05g01618 869 MobiDBLite consensus disorder prediction 116 147 - -
Eupl05g01618 869 SUPERFAMILY Homeodomain-like 658 722 IPR009057 -
Eupl05g01618 869 ProSiteProfiles 'Homeobox' domain profile. 653 716 IPR001356 GO:0003677
Eupl05g01618 869 MobiDBLite consensus disorder prediction 731 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01618 Eupl-Chr5 40139151 40150131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01618 443 838 Homeobox Transcription Factor Family AT4G34610 43.358 3.88e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Eupl05g01618 POX 7.3e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01618 - - nnu:104601285 1071.23