Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01614 ATGGTTTTTCTCTGGTTCTTCATCTGGGTATTCTTCAATTCGAGTTTCGCTCAGCAATCTTACGACCCAAGCTCTTGTTCTTCGGATACCTTCCAACCAGGTACTAGATACACCTGCAATTCCTTCCAAAACTCATGCCAAACTTTCATGGTCTACAGAGCTAGACAGTTCCAGACCATCTCGGAGATTTCTGAATTGCTTGGTACTAATCTTGATGAGTTACTCCACTTGAACAATCTAACATCTCCTTCGCAGAATCTTAAAATTGGTAGAGAAGTTCTTGTTCCCATTAATTGTTTTTGCTCAGGCAAGTTTTTTCAAGCAAATTTCAGCTACATAGTCCCTGACGGCGCAACCTACTCGGAGATTGCTTGCGGGGTTTTTGAAGGTCTGGTGAAATCACTTACGCTCATCGTTGAAAATCCGTTTCCAGAAAATAATCTACAGGTGGGGGCTAAGCTTCACGTGCCTTTGAGATGTGCTTGTCCTGATAAGCTCAGTAGTAGCAGTGGCGTGAAGTACCTTGTGACCTACCCTTTTGTGAAAGGTGATGGAACATTTAAACTGGCTAAGAAATTCGGCATTCTTCCTGGTGAAATATGGGCTGCAAACAATTTAGATCCTACGCCAACTGTTTATCCTAACACAACTGTTTTAGTTCCTTTGAAAAAGAATCCAGTCATTTCTTTTAATGTCTCGGATTCTCAAGTTCCAATTCCTGGTTTTCTTCCGACTGTTCCAATAGAAAGAACAAAGAAGAAAAGTTCACGGAATTTGTATATTGCGGGATCGGTTGTGGGGATTCTTTTGGTTCTTTTGGGCTTATTTGCAGGTGGGTTTTATCTCAAGAACTTGAGAAAATGGAAGGGTGAGAAGTTACAGTCTTCAACTGCTAGAAGCTCACCAGCTTCATGTTTATCTCCAGATCTTCTGTCTATGTTTAAATATTCTTTATATAACTACAGCTTTGAGGAGCTTAGGAGAGCAACAAGGGATTTTAGCACAGACAGAAAGATGGGTAGTTCTGTTTACAAGGGAAGAATTGATGATTTTGAAGTGATGATCAAGCAGATGAGGTACGAAGACACTCGCCGGATTATCGATATATATTCGAAAATCAACCACATAAACATTGTGCAATTGCATGGTGTATGCTATGGAGAAAGTGACTGTTCTTGGTCTTACCTAGTATTTGAATTTGCTGGCAAGGGCTGCTTGAGGGACTGTCTATCCAATCCATCTAATGTTCTTCAATGGCGTGAACGGACACAGATAGCTTTTGATATCGCAACCGGGCTTCATTATTTGCACCATTGTACAATGCCATCATACATGCACATGAACATAAATACTAGAAATATTTTGATAACAGAGGATTGGAGGGCAAAGATTGCAAATTTTGGAACTACTACTTTTGTTGGTTCCTCAAAAGGGAAGGGTGATATGTTAGCAAGTGTAGGGGGATGGGTTGCACCAGAGTACCTTCTTCATGGCTTGGTTTCAGCAAAAGTAGACATCTTTGCTTTTGGGGTTGTTTTGTTTGAACTTATCTCAGCACAAGAGGCCATCGATGGGAGATTGTTCAAAGATTTCATTGGATTCTTGAGAGGGGGAGGTGGAGAAAGTGGTTACTTTGAGAAATTGAGGGGTTTCATGGATCCATGTTTGAAGGATGATTATCCCCTCGCAGAGGCTTTATGTTTGGCTGTTCTAGCTAAGGCTTGTGCGGAAGAGGACCCTTTACATAGACCATCTACGAATGACATCTTAAAGGTCCTTGCCAGGATGATCTGA 1794 0.4125 MVFLWFFIWVFFNSSFAQQSYDPSSCSSDTFQPGTRYTCNSFQNSCQTFMVYRARQFQTISEISELLGTNLDELLHLNNLTSPSQNLKIGREVLVPINCFCSGKFFQANFSYIVPDGATYSEIACGVFEGLVKSLTLIVENPFPENNLQVGAKLHVPLRCACPDKLSSSSGVKYLVTYPFVKGDGTFKLAKKFGILPGEIWAANNLDPTPTVYPNTTVLVPLKKNPVISFNVSDSQVPIPGFLPTVPIERTKKKSSRNLYIAGSVVGILLVLLGLFAGGFYLKNLRKWKGEKLQSSTARSSPASCLSPDLLSMFKYSLYNYSFEELRRATRDFSTDRKMGSSVYKGRIDDFEVMIKQMRYEDTRRIIDIYSKINHINIVQLHGVCYGESDCSWSYLVFEFAGKGCLRDCLSNPSNVLQWRERTQIAFDIATGLHYLHHCTMPSYMHMNINTRNILITEDWRAKIANFGTTTFVGSSKGKGDMLASVGGWVAPEYLLHGLVSAKVDIFAFGVVLFELISAQEAIDGRLFKDFIGFLRGGGGESGYFEKLRGFMDPCLKDDYPLAEALCLAVLAKACAEEDPLHRPSTNDILKVLARMI* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01614 597 SUPERFAMILY Protein kinase-like (PK-like) 306 593 IPR011009 -
Eupl05g01614 597 CDD LysM 181 220 IPR018392 -
Eupl05g01614 597 Gene3D Phosphorylase Kinase; domain 1 311 400 - -
Eupl05g01614 597 ProSiteProfiles Protein kinase domain profile. 312 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01614 597 ProSiteProfiles LysM domain profile. 50 95 IPR018392 -
Eupl05g01614 597 Pfam Protein tyrosine and serine/threonine kinase 350 522 IPR001245 GO:0004672|GO:0006468
Eupl05g01614 597 Gene3D Transferase(Phosphotransferase) domain 1 402 597 - -
Eupl05g01614 597 ProSiteProfiles LysM domain profile. 176 220 IPR018392 -
Eupl05g01614 597 SMART LysM_2 177 221 IPR018392 -
Eupl05g01614 597 SMART LysM_2 51 96 IPR018392 -
Eupl05g01614 597 Pfam LysM domain 59 96 IPR018392 -
Eupl05g01614 597 Pfam LysM domain 182 221 IPR018392 -
Eupl05g01614 597 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 3 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01614 Eupl-Chr5 40072044 40073837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01614 1 597 Receptor kinase-like Gene Family AT2G23770 31.703 1.27e-77 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Eupl05g01614 PK_Tyr_Ser-Thr 2.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01614 - - twl:120001848 746.888