Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01596 ATGGCTAGTCAAATCCATGACAACGGTAATGCCAAAAGCTCGATCTCGGTAGAAAGCTTCTGCATCAGCAAAGACCCGTTGAACTGGGGAGCGGCGGCTGAGTCTCTAAAGGGTAGCCATCTTGATGAAGTTAAGCGGATGGTGGAGGAATTTCGTAAGCCAGTTGTTAGACTCGGCGGTGAGACCCTGACCATCTCTCAGGTGGCTGCGATCGCTGCTCATGAAGCAAGTGTCAAGGTCGAACTTTCTGAATCAGCAAGGGCTGGAGTGACAGCAAGCAGCGATTGGGTTATGGAGAGCATGAACAAAGGGACAGACAGCTATGGTGTCACAACTGGGTTCGGTGCCACTTCACATAGGAGAACCAAACAAGGAGGAGCCCTTCAGAAGGAACTTATTAGATTCTTGAACGCTGGAGTATTCGGAAATGGGACGGAATCTTGCCACACATTGCCTCACTCCACAACAAGGGCTGCTATGCTGGTGAGGATCAACACCCTTCTCCAAGGATACTCCGGTATCCGGTTTGAGATCTTGGAAGCACTCGCCAAATTCCTCAATCACAACATCACCCCATGTTTGCCACTCAGGGGCACGATCACCGCATCGGGTGATCTTGTACCTTTATCATACATTGCTGGGCTTTTGACTGGCCGACCCAACTCCAAAGCCGTGGGACCCAATGGGGAATCTCTTGATGCCGTTGATGCATTCGAACTAGCTGGGATCAACAGTGGATTCTTCGAATTACAGCCCAAGGAAGGTCTTGCTCTTGTTAATGGCACTGCGGTGGGGTCCGGATTGGCTTCTATGGTTTTATTTGAGACCAACATCCAAGCTGTCCTATCCGAGGTCCTATCTGCGATCTTTGCCGAGGTCATGCAAGGCAAACCGGAGTTTACGGACCATCTGACCCACAAATTGAAACATCACCCTGGTCAAATTGAGGCTGCAGCCATCATGGAACACATCTTAGATGGGAGTTCCTACCTGAAAGCATCTCTGAAGCTACATGAAATGGATCCGTTACAGAAACCGAAACAAGACCGATACGCTCTCCGTACTTCTCCTCAATGGTTGGGCCCACAGATCGAAGTGATCCGATCATCAACAAAGTCAATCGAGCGTGAGATCAACTCGGTCAACGATAACCCATTGATCGATGTATCAAGGAACAAGGCTCTCCATGGTGGGAACTTCCAGGGAACTCCGATTGGTGTTTCCATGGACAACACTCGATTAGCCATTGCTTCAATCGGGAAGCTGATGTTCGCTCAATTCTCCGAGCTTGTTAATGATTTCTACAACAATGGGTTGCCTTCAAATCTATCAGGTGGCAGGAATCCTAGCTTGGATTATGGGTTCAAGGGAGCAGAGATAGCAATGGCGTCTTACTGTTCCGAACTCCAATTCCTCGCTAATCCAGTCACAAATCATGTTCAAAGTGCAGAGCAACACAACCAAGATGTGAACTCACTGGGCTTGATTTCTTCAAGGAAAACAGCCGAAGCTTTGGATATCTTGAAGCTTATGTCTTCGACCTTCTTAGTTGCGCTTTGCCAATCGATCGACTTGAGGCATTTGGAGGAGAATTTAAAGAGCACAGTCAAGAACACAGTGAGCCAAGTAGCTAAGAGAGTTTTAACCATGGGTGTTAATGGGGAGCTTCACCCTTCAAGGTTTTGCGAGAAGGACTTGCTCAAGGTTGTCGATCGCGAATACGTGTTTGCCTACATTGACGACCCATGCAGCGCCACTTACCCACTGATGCAGAAACTAAGACAAGTCCTCGTTGAACATGCGCTGATCAATGGTGATAACGAGAAGAATTCAAACACTTCAATCTTCCAAAAGATTAGCGCGTTCGAAGAGGAATTGAAGACCCTTTTGCCGAAGGAAGTGGAGAGTGCGAGGAGCGCTTGCGAGAGCGGGAACCCGGCAATCCCGAACCTGATTAAGGAATGCAGATCGTACCCATTGTATAAGTTTGTGAGGGAAGAGTTGGGGACTGGGCTCCTGACTGGCGAGAAGGTTCAATCACCAGGTGAGGTTTTCGACAAGGTGTTCACGGCTATGTGCGAGGGGAAGTTGATCGATCCGATGCTTCACTGTCTCAGGGATTGGAATGGTGCTCCTCTCCCTATCTGTTAG 2151 0.4872 MASQIHDNGNAKSSISVESFCISKDPLNWGAAAESLKGSHLDEVKRMVEEFRKPVVRLGGETLTISQVAAIAAHEASVKVELSESARAGVTASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGVFGNGTESCHTLPHSTTRAAMLVRINTLLQGYSGIRFEILEALAKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLDAVDAFELAGINSGFFELQPKEGLALVNGTAVGSGLASMVLFETNIQAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYLKASLKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEALDILKLMSSTFLVALCQSIDLRHLEENLKSTVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYPLMQKLRQVLVEHALINGDNEKNSNTSIFQKISAFEEELKTLLPKEVESARSACESGNPAIPNLIKECRSYPLYKFVREELGTGLLTGEKVQSPGEVFDKVFTAMCEGKLIDPMLHCLRDWNGAPLPIC* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01596 716 PANTHER HISTIDINE AMMONIA-LYASE 19 716 IPR001106 -
Eupl05g01596 716 Gene3D - 17 262 IPR024083 -
Eupl05g01596 716 FunFam Phenylalanine ammonia-lyase 529 650 - -
Eupl05g01596 716 FunFam Phenylalanine ammonia-lyase 16 262 - -
Eupl05g01596 716 CDD PAL-HAL 61 526 IPR001106 -
Eupl05g01596 716 Gene3D - 529 650 IPR023144 -
Eupl05g01596 716 SUPERFAMILY L-aspartase-like 25 716 IPR008948 GO:0003824
Eupl05g01596 716 Gene3D Fumarase/aspartase (Central domain) 263 711 - -
Eupl05g01596 716 FunFam Phenylalanine ammonia-lyase 263 563 - -
Eupl05g01596 716 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841
Eupl05g01596 716 Pfam Aromatic amino acid lyase 63 538 IPR001106 -
Eupl05g01596 716 NCBIfam phenylalanine ammonia-lyase 25 705 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01596 Eupl-Chr5 39851670 39855831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01596 23 716 Monolignol Biosynthesis Gene Families AT2G37040 85.159 0.0 1251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01596 K10775 - nnu:104601277 1286.94