Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01592 ATGAAGATCCAAGTGGAAGTTGCCCTTACATGTATCATTACCATTCTCTTGTTGCACTACATTTCTTGTGATGAAGTTCTGGAAGGGTCGGGTATAAACAAATGGACATGTTCATGTGCCTCTGCTCATCAAGGAAATCAGGTGTATTCTGTTGCAGCTAACTGTTCTACATCCTGTGATTGCAGTCCTGAAGAGGCTGCAGGAGGATCAAGTGGAGATAGATGGACATGTCTTTGTGCTGCTGAAGGATTCTCCAAAGCACCAGGCAACATCCATGATGCCAGTTGTTTTACAGCCTGCAACTGCACATCCGGCTCTCCTGGTGAACCTAAAGATTCAGGGAAGCGCATTTCCAACAAATTTGTTGTGTACATTCTCTTACTGTGTGTGGTCCTCACGACTCTTGCATTTCTTGCTTCTCTGGGGTACTATGTCTATCGAAGGGACAAATGTCCTGTTCAACCACCAGTATTCTCATCAGATAATGACACAAGCTGCAATAGCGCAACCAACCTAATAAACCATGGGTCCACTTCAGTGCCAGAGTTCAAAGTTAATATAGATTCCCCGGTTAACCCTATCATAGGGTGTATAAGAAAGGTGTCTTTCATGTTTCGAAGCAAGAGAGGAACCATACCTGGGACAATTATCCAATTTTCATACTCTGAATTGGAGCTAGCTACTAATAAGTTCTCCAGTCCTAATCTGATTGGGCTTGGGGGAAGCAGCCATGTTTATCGTGGTCAGCTCAAAGATGGTAGAACTGTTGCTGTTAAGCGACTAAAAACAAAGGGAGGACCAGATGCGGACTCTGTGTTTCTAACTGAGATTGAACTGATATCAAGACTCCACCACTGTCACGTGGTGCCGTTGCTTGGCTACTGTTCAGAATCCCAAGGAAGACATGTTGAGAGGCTACTTGTGTTTGAGTACATGTTCAATGGTAATCTGAGAGATTGTTTGGATGGGACTCAAGAGAAAGAACCCATGGATTGGGGGACGCGCGTTGGCATTGCACTCGGAGCTGCAAGGGGCTTGGAATATCTCCATGAAGCAGCTGCTCCAAGGATTTTGCATAGAGATGTCAAATCCACCAACATTCTTCTAGATGATAAGTGGAGAGCTAAAATAACTGATCTTGGTATGGCCAAACGCTTAAGGACTGATGACCTTCCCAGCTGTTCCAATTCCCCGGCAAGAATGCAGGGGACTTTTGGGTATTTTGCACCAGAGTATGCAATTGTTGGAAGGGCCTCTCTTAAGTCGGATGTTTTCAGTTTTGGGGTGGTTCTTCTGGAGTTGATCAGCGGTCGACAACCTATCCATAAATCATTGAACAAAGGACAAGAAAGCCTTGTCATATGGGCTACCCCTCGTTTACAGGATAGTAAGAGGGTAATCTCAGAATTACCTGACCCACTTTTGAAAGGGAACTTTCCAGATGAAGATATGCAGATAATGGCTTATTTAGCAAAGGAGTGCCTTCTGTTGGATCCTGACTCAAGACCAACCATGAGTGAGGTTGTTCAAATCCTTTCTACTATTGCACCAGAGAAATCTAGGAGGCGGAATTTCCCTGTCAATCTTTTTCAGAGCCCATCTACACGTAGCATGGCAAGTGTAGCAACCATGGAGAGGCATTGGGAACAAGAACAAGCTGAGGATTCCATTGATGCAGAGGAGCTGAGGCGATCTATGTCCGTGAAATGGTCTGCTCGGTGTTCATTGCCACTAACTGTAGACCGTACTCAACGTGTTGAAGATAGCATCAAAGAGGGAGATACAGTTCTGTCAGCTGAGTATATAGAAAGACTAATCCTCTTAACTTCAAAAGCTAGGAGTTGGCGTGCCCCCGACGATGAAACAGTGGACTTGACTGAACCCCGGTTTGAATCATTCTGGCAGCCAAACGTTCAGTCCCTTTGA 1926 0.4507 MKIQVEVALTCIITILLLHYISCDEVLEGSGINKWTCSCASAHQGNQVYSVAANCSTSCDCSPEEAAGGSSGDRWTCLCAAEGFSKAPGNIHDASCFTACNCTSGSPGEPKDSGKRISNKFVVYILLLCVVLTTLAFLASLGYYVYRRDKCPVQPPVFSSDNDTSCNSATNLINHGSTSVPEFKVNIDSPVNPIIGCIRKVSFMFRSKRGTIPGTIIQFSYSELELATNKFSSPNLIGLGGSSHVYRGQLKDGRTVAVKRLKTKGGPDADSVFLTEIELISRLHHCHVVPLLGYCSESQGRHVERLLVFEYMFNGNLRDCLDGTQEKEPMDWGTRVGIALGAARGLEYLHEAAAPRILHRDVKSTNILLDDKWRAKITDLGMAKRLRTDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLKSDVFSFGVVLLELISGRQPIHKSLNKGQESLVIWATPRLQDSKRVISELPDPLLKGNFPDEDMQIMAYLAKECLLLDPDSRPTMSEVVQILSTIAPEKSRRRNFPVNLFQSPSTRSMASVATMERHWEQEQAEDSIDAEELRRSMSVKWSARCSLPLTVDRTQRVEDSIKEGDTVLSAEYIERLILLTSKARSWRAPDDETVDLTEPRFESFWQPNVQSL* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01592 641 Gene3D Phosphorylase Kinase; domain 1 206 311 - -
Eupl05g01592 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Eupl05g01592 641 SUPERFAMILY Protein kinase-like (PK-like) 212 512 IPR011009 -
Eupl05g01592 641 CDD STKc_IRAK 237 512 - -
Eupl05g01592 641 FunFam receptor-like serine/threonine-protein kinase NCRK 205 311 - -
Eupl05g01592 641 SMART serkin_6 231 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01592 641 FunFam receptor-like serine/threonine-protein kinase NCRK 312 524 - -
Eupl05g01592 641 ProSitePatterns Protein kinases ATP-binding region signature. 237 259 IPR017441 GO:0005524
Eupl05g01592 641 Pfam Protein kinase domain 235 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01592 641 Gene3D Transferase(Phosphotransferase) domain 1 312 532 - -
Eupl05g01592 641 PANTHER OS01G0750732 PROTEIN 87 535 - -
Eupl05g01592 641 ProSiteProfiles Protein kinase domain profile. 231 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01592 Eupl-Chr5 39752402 39768874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01592 1 563 Receptor kinase-like Gene Family AT2G28250 57.746 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Eupl05g01592 Pkinase 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01592 - - ming:122087054 981.474