Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01589 ATGCAGATTGAAGCAAAGGTGGAAACTTTGTTGGAGTGCAATGGCTATGGTAGTTCAAGATCTGTAAGATTTCAAGATGATCTTGAAGTTCCCAAGTTCACAACAAGCAAAGTAGACGATGTGAGTAAGCTGATGATGTACAAGATTGATGGGAGACAGATACCTGAGCCAAGCTCTAAGAAGGCCAGGGAGGGACCGGAAAAGTTAGGCAGATCATTGAAAGCTAAAGTACTGTCTAGAGTCTTTTCTGAGGACTATGAGAGAGTAAAGAAGAAGATATTGGATCCTCGAGGACCCGTCATACGCCGATGGAACAAAATTTTCTTAGTTGCATGTTTAATTTCTCTTTTCGTGGACCCTCTATTTTTTTTCTTGCCGGGGGCTCAGAAGGAGATGTGCATAGATATAGGGATACCCCTCGAAGTAGCCCTCACGATAATACGATCTGTGGCTGATGTGTTTTACGTGATTCAAATTTTCATCCGGTTCCGTACAGCTTATGTTGCCCCTTCCTCTCGTGTATTTGGAAGAGGAGAGCTTGTTATAGATCATTCGAAGATTGCATCAAGGTACCTAGGCAAGGGATTCTGGATTGACCTCGTGGCCGCTCTACCCCTTCCACAGGTGTTAATTTGGGCTGTAATTCCCAATCTAAAGGGCTCAACAATGACCAATACCAAAAATGTGCTTCGATTCATCATCATTTTCCAGTACCTCCCGAGGCTATTTCTTATTTTTCCACTCTCATCACAAATTGTCAAGGCCACTGGGGTTGTGACAGAGACAGCATGGGCGGGGGCTGCTTATAACCTGATGCTCTATATGTTGGCAAGCCATGTATTAGGAGCCTGTTGGTACCTCTTATCGATTGAGCGACAAGAAGCGTGTTGGAGACATGTCTGCAGTCTTCAGAATGCAACCTGTGGGTATGAATTCTTTGACTGCCATAAAATGGCTGACTCTAGTAGGGACACCTGGTTCAAATCGAGCAACATCACAGAGCTCTGTGACCCAAGTAATGGCTTCTTTCAGTACGGTATATATGCCGATGCATTGACTTTTGATGTTACATCTTCAACCTTCTTCAACAAGTACTTCTACTGCCTTTGGTGGGGCCTGAAAAACCTGAGCTCTTTAGGACAAAATCTCTCAACAAGCACTTATGTTGGAGAAATAAGTTTCGCCATCATCGTGGCAATTCTTGGGTTGGTGCTTTTCGCATTGCTCATTGGGAATATGCAAACTTACCTCCAATCTACGACAGTCCGATTGGAAGAGTGGAGAATCAGGAGAACTGACACGGAGCAATGGATGCGCCACAGGCAGCTACCACAGGAATTGAGGCAGTGCGTACGAAGGTACGATCAATATAAGTGGGTGGCAACCCGAGGAGTAGATGAAGAAAATCTTCTCAAAGGACTCCCAATGGACCTTCGTAGAGACATCAAACGCCACTTATGTCTTGATCTAGTTCGACGAGTACCACTCTTTGATCAGATGGATGAGCGGATGCTGGATGCCATATGCGAGAGGCTGAAGCCCGCCCTATGCACAGAAGGAACGTGCCTAGTGCGAGAGGGTGACCCGGTGAATGAGATGCTCTTTATTATTCGAGGCAACCTCGATTCCTACACTACCAACGGTGGTCGTACCGGGTTCTTCAACTCGTGTCGTATTGGCCCAGGTGATTTTTGTGGAGAAGAACTGCTGACGTGGGCCCTGGACCCACGTCCAAGCGTCATTCTACCATCATCCACACGTACAGTCAAAGCCATCTCCGAAGTCGAAGCCTTTGCTCTCATTGCAGAGGATTTAAAGTTTGTAGCATCGCAATTTCGTAGACTCCATAGCAAGCAACTAAGGCACAAGTTTCGATTCTATTCGCACCAATGGCGCACGTGGGCAGCATGCTTCATACAAGCTGCGTGGCGTAGGTTTAAGAAACGGAAGGATGCAGCTGATCTCAGGGCGAGGGAGAGCCCAATGGCCATGTCTCCCGAGCCGGAATTGGAATCAACGGATATGTCAGTGACCCCACCAGGATCAGGCTTAGCTGTATACGCAGTACGGCTAGCAGCGAGCACTAGGAGAGGAGGAGGCAAGCTATGTGGGTCAGATTCTGGTGTTGTTAGCTCATTACAAAAGCCAGCCGAGCCTGATTTTACAGTAGAGGAGTGA 2178 0.4697 MQIEAKVETLLECNGYGSSRSVRFQDDLEVPKFTTSKVDDVSKLMMYKIDGRQIPEPSSKKAREGPEKLGRSLKAKVLSRVFSEDYERVKKKILDPRGPVIRRWNKIFLVACLISLFVDPLFFFLPGAQKEMCIDIGIPLEVALTIIRSVADVFYVIQIFIRFRTAYVAPSSRVFGRGELVIDHSKIASRYLGKGFWIDLVAALPLPQVLIWAVIPNLKGSTMTNTKNVLRFIIIFQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWRHVCSLQNATCGYEFFDCHKMADSSRDTWFKSSNITELCDPSNGFFQYGIYADALTFDVTSSTFFNKYFYCLWWGLKNLSSLGQNLSTSTYVGEISFAIIVAILGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMRHRQLPQELRQCVRRYDQYKWVATRGVDEENLLKGLPMDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRFKKRKDAADLRARESPMAMSPEPELESTDMSVTPPGSGLAVYAVRLAASTRRGGGKLCGSDSGVVSSLQKPAEPDFTVEE* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01589 725 CDD CAP_ED 496 627 IPR000595 -
Eupl05g01589 725 SUPERFAMILY Voltage-gated potassium channels 95 418 - -
Eupl05g01589 725 Gene3D Jelly Rolls 494 614 IPR014710 -
Eupl05g01589 725 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 83 721 - -
Eupl05g01589 725 Gene3D Helix hairpin bin 423 487 - -
Eupl05g01589 725 FunFam Cyclic nucleotide-gated ion channel 1 494 612 - -
Eupl05g01589 725 Pfam Ion transport protein 104 423 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Eupl05g01589 725 PRINTS EAG/ELK/ERG potassium channel family signature 409 418 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl05g01589 725 PRINTS EAG/ELK/ERG potassium channel family signature 159 168 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl05g01589 725 PRINTS EAG/ELK/ERG potassium channel family signature 391 402 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl05g01589 725 PRINTS EAG/ELK/ERG potassium channel family signature 459 466 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl05g01589 725 PRINTS EAG/ELK/ERG potassium channel family signature 365 382 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl05g01589 725 PRINTS EAG/ELK/ERG potassium channel family signature 276 286 IPR003938 GO:0005249|GO:0006813|GO:0016020
Eupl05g01589 725 SMART cnmp_10 496 627 IPR000595 -
Eupl05g01589 725 Gene3D - 106 420 - -
Eupl05g01589 725 MobiDBLite consensus disorder prediction 655 677 - -
Eupl05g01589 725 MobiDBLite consensus disorder prediction 696 725 - -
Eupl05g01589 725 SUPERFAMILY cAMP-binding domain-like 426 622 IPR018490 -
Eupl05g01589 725 FunFam Cyclic nucleotide-gated ion channel 1 423 487 - -
Eupl05g01589 725 ProSiteProfiles cAMP/cGMP binding motif profile. 496 593 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01589 Eupl-Chr5 39729208 39738670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01589 70 724 Ion Channels AT2G28260 76.364 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01589 K05391 - nnu:104594881 1211.05