Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01585 ATGCAAGGGGCGCTTAATCTCAGACGCTCCCACCTACTAGAAGAATCCAACCGGGCCATGCAGCCATGCAATCTTGTCCCTCACTCTCCGTCTGATTCTTCGTTGACAGACTGCAACTCCCCTGATTCTTCTCTTTGTCCGGCGTTCAAGCGTCGGAAAATCGACGGATCAGATTCTTCCGTCGAAGAAGAAATCAACGGCAACGAGGACGAGAAATTCGTCCAGAGCGCCTTAGCCTTCGATTGGGCCGAAGGAGGATGTCTCGCGTTTGATGCTGATGCTGATGCGGACAATCACATAGCAAAGAAGAGCCGTCCTCCTCCACCATTAAACTTACCAGTCCCAGTCCATTATCATCATCATCATAGCGGCAATCCGGTAACGATGTTAGATTTTTCTGGTATGGCCGTCAGATATAACGGCTCTTCGAGCCCCTGCTTTACAGGCAGTTGGGGGAAGCTACCGTTAAACGAGAACGATTCCGAAGACATGGTATTGTACTCAGTCTTGAAAGAAGCCACGTTGAGAGGTTGGCAGCCGGTCACGCCGATGACTCCTTCCGTATCTACGACGGATTATGCGACTCCAACCGGGCTGAAGCCGAAGCCAAAGCCAAAGCCTAAGCCGAAGCCAGAACCAGCAAACGAGACCGCTACCGAAAGGGGAACGAAGAAGAAAAGAGCCGGTCCGCATTATCGAGGTGTGAGGGAGCGGCCGTGGGGGAAATTCGCGGCTGAGATTCGTGACTCGGCGCGCCAGGGAGCTAGAGTGTGGCTTGGAACGTTTGATACAGCTGAGGAGGCCGCAGTGGCTTACGATCGAGCCGCTTACAAGATGCGTGGGGCCCGGGCCCTGTTGAATTTCGCAAGCAGTGCCAGTGACAATGGCTCGGAGGCAGTAGCTGGTCGAAGCAGTAACAGTGGCTTGGCTACGAGTCTACCCCGTTGTGATGAAGGCTCATAG 963 0.5379 MQGALNLRRSHLLEESNRAMQPCNLVPHSPSDSSLTDCNSPDSSLCPAFKRRKIDGSDSSVEEEINGNEDEKFVQSALAFDWAEGGCLAFDADADADNHIAKKSRPPPPLNLPVPVHYHHHHSGNPVTMLDFSGMAVRYNGSSSPCFTGSWGKLPLNENDSEDMVLYSVLKEATLRGWQPVTPMTPSVSTTDYATPTGLKPKPKPKPKPKPEPANETATERGTKKKRAGPHYRGVRERPWGKFAAEIRDSARQGARVWLGTFDTAEEAAVAYDRAAYKMRGARALLNFASSASDNGSEAVAGRSSNSGLATSLPRCDEGS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01585 320 MobiDBLite consensus disorder prediction 180 237 - -
Eupl05g01585 320 MobiDBLite consensus disorder prediction 291 320 - -
Eupl05g01585 320 FunFam Ethylene-responsive transcription factor 2 231 290 - -
Eupl05g01585 320 Pfam AP2 domain 230 281 IPR001471 GO:0003700|GO:0006355
Eupl05g01585 320 PRINTS Ethylene responsive element binding protein signature 232 243 IPR001471 GO:0003700|GO:0006355
Eupl05g01585 320 PRINTS Ethylene responsive element binding protein signature 255 271 IPR001471 GO:0003700|GO:0006355
Eupl05g01585 320 MobiDBLite consensus disorder prediction 291 313 - -
Eupl05g01585 320 SMART rav1_2 231 295 IPR001471 GO:0003700|GO:0006355
Eupl05g01585 320 PANTHER DNA-BINDING DOMAIN 197 294 IPR044808 GO:0003700|GO:0009873
Eupl05g01585 320 CDD AP2 230 291 IPR001471 GO:0003700|GO:0006355
Eupl05g01585 320 ProSiteProfiles AP2/ERF domain profile. 231 289 IPR001471 GO:0003700|GO:0006355
Eupl05g01585 320 MobiDBLite consensus disorder prediction 180 196 - -
Eupl05g01585 320 SUPERFAMILY DNA-binding domain 231 290 IPR016177 GO:0003677
Eupl05g01585 320 Gene3D AP2/ERF domain 231 290 IPR036955 GO:0003700|GO:0006355
Eupl05g01585 320 MobiDBLite consensus disorder prediction 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01585 Eupl-Chr5 39675952 39677278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01585 145 288 AP2-EREBP Transcription Factor Family AT4G17500 54.305 2.39e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl05g01585 Ten_N 0.0004 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01585 K09286 - msin:131245937 278.1