Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01560 ATGGAGTGTAGCTCCAGAAAAAAAATTTCCATTTTTAACTGGAATTTTTTTATAAGTGGCACACTATTCCTATTGTTCTGCAGGTTGCCTGGGACACGTCCGCTTTGTCAACAGAGTGAAACAATCCATTTCTCACCTTGTGCTTCGACTTCCTCTTCCTCTCAAAATTTGAATCGATTACGAGCCGAATTCTATAAATCGAGAAAAACAGGGATCACAGCCACAGTTGGTGGGGTCATAGGAGTTCCAACCCTGACACCTTCACAAACTGCTCATATTAAAAAACCAAAAAAACAAAATATAGCAGCTGTGGTCGGTGGTTGTGCTGGTGCAATTCTGCTTGTGGTTGTCACCGTATTACTTGTGTATGTCTGCTTGATGCGTGTTAAAAGGTTTGTGAGGAGAACATCAGAGACGGGATCTTCTCTACCATCTCCTACTGCTGAGTGGGCAAGAGAGAATGGATCTCCCCATATTGGTGCTTTATCTTCATGTCAAACACAGAATCTTCAGCAGTTAACTATGGTGGAGTTGGAGCATGCTACATCCAATTTTAGTCAAATAAATGTTATAGGTGAAGGTGGTTTTGGCTTAGTTTACAAAGGAATGCTTCAGGATGGGTCTATCGTGGCTATCAAGAGACGCCTACATTACCCGAGTCAGTATTTTGTTCAAGAGGTAGAGAACATAGGTTGTATCTGCCACGAGCATCTTGTCAAGCTTATTGGTTATTGCCAAGAAAGCCATCAACAGTTGCTAGTCTATGACTATCTCCCTAACGGAAATGTTGGGAATCATCTATATGGTTTACCCATTGGAAAGCTAGACATCCGGCAACGGTTGTCCATAGCTCTTGGTGCAGCTAAAGGACTGGAGTATCTACATTGTTTGGTACCTCCTTTCCCACACATGAACTTCAGAACGCGCAACGTTCTTCTAGATGACAACTTAGCTGCTAAGGTTTCTGATTTTGGACTGTCCAAATTAATGGTTGAGGGTAACCGCGCTGGATCATCTTTCGGCATTGATTGCTTTCTTGACCCAGAGTTGAGATTATCAAATGAGTTTTCCGAACGAAGTGATGTGTACAGTTTTGGGGTATTCTTACTGGAGCTGATAAGTGGACGTGAAGCACTTGATAGGAGTCAGTCAGAACCACAGCAGAATCTAGTAATACAGGCTAGGGGTATCAATGATCTTGATGGGTTTGTCGACAAGACATTAAGGGAGAACTCAATGGACTCCGTGCAACGGATGATGGAGCTGGCATTGCAGTGTATAGATACCTGTATAAGAAGACTGACAATGAAGATGGTGGCTGGGGAGCTTGAACTGATTCAAAAAAGAGAAATGGGTCATCAGGGTATTGGTCTTGATCGGAAAACCCTAAAGAAGCTTATCTCGCTCTCACTATCTGCTGATTCTGCTCTGTCTGAAATCGCCAAAGCAATGGCGTTTCGAATCCTTCTCGTTCTCTCCATCTCAGTTCTTCTGCTTTTTAATGGCTTCTGCTCTGCAACTCTCTCAAAAGAATCATCAAAGAAAGACGAAGATCTCGACGATGATCTCAGTTTCCTGCTTGATGACAGCGACGACGAAGCTCCGATCAGCAAGCATTCTCCAGATCTAGATCAATTCGACGAATATGACGAAGATTTTGAGAACTATGACGACTTCGAGGGCTCGGAATCGGATCCAGATCAACAGTATTCACCCCCAGCAGTCGACGAGAAGGACGTCGTCGTGCTGAAGGAGGGGAATTTTAGTGATTTCGTGGAGAAGAATCGGTACGTAATGGTGGAATTCTACGCGCCGTGGTGCGGACACTGCCAGGCTCTTGCTCCCGAGTACGCAGCCGCTGCGACGGAGTTGAAGGGAGAGGCGGTGCTTGCAAAGGTGGATGCGACGGAGGAGAGCGAACTGGCGCAGAATTATAACGTGCAGGGGTTTCCGACTGTGTATTTCTTCGTCGACGGAGTTCATAAGCCTTATCCTGGCCAAAGGACCAAAGATGCCCTTGTGACTTGGATTAGGAAGAAAACAGGACCTGGAATTTACAACATAACCACGGCTGAGGATGCAGAGCACATATTGAATACTGAAAGTAAATTGGTCGTGGGCTTTCTTGACTCTTTGGTGGGTCCTGAAAGTGACGAGCTTGCTGCTGCATCAAGACTCGAAGACGATGTCAACTTCTACCAAACTGCCAGTTCTGATGTGGCAAAGCTTTTCCACATTGATCCCAAGGCTAAACGTCCTGCTTTGGTCATGCTCAAGAAAGAGGCCGAGAAATTAAGCCACTTCGATGGTCAATTTACTAAGTCTGCCATAGCTGAGTTTGTGTTTGCCAACAAACTTCCTCTAGTGACCACATTTACTAGGGAAAGTGGTCCATTGATTTTTGAGAATCCAATTAAGAAACAGCTTTTGCTCTTTGCCACTTCAAACAGTTCGGAGAAGGTTATTCCAACATTCGAAGAGGCAGCAAAACTTTTCAAGGGAAAGCTTATCTTCGTCTACGTGGAAATGGACAATGAAGATGTTGGGAGACCAGTTTCAGATTACTTCGGTGTTACTGGAGACGCTACCAAAGTTCTTGCATACACAGGAAATGATGATGCCAAGAAGTACGTACTCGATGTTGAACTAACCTTAGACAGTATTAAGGCATTTGGGGAGGATTTCCTGGAAGACAAGCTTAAGCCTTTCTTCAAGTCTGACCCCATTCCGGAAACTAATGATGGGGATGTGAAAATCATAGTTGGGAATAACTTCGACGAGATTGTGTTGGATGAGTCGAAGGATGTTCTTCTTGAGATATATGCTCCTTGGTGTGGGCATTGCCAAGCTCTGGATCCCACTTACAACAAGCTAGCCAAGCACCTGCGTGGCATTGATTCTCTGGTTATTGCCAAGATGGATGGAACCACCAATGAGCATCCCAGGGCCAAGACTGATGGGTTCCCCACACTTCTCTTCTTCCCAGCAGGAAACAAGAGTTTCGATCCAATTACTGTCGACACTGATCGGACGGTAGTGGCATTCTACAAATTCATTAAGAAGCATGCATCAATCCCTTTCAAGCTCCAGAAACCAGTCGCAAAATCAGAGGGTGTCGATGCCACCAAGAGCCATGAGAGCAGCACTGACGACGTGAAGGATGAATTGTGA 3171 0.4497 MECSSRKKISIFNWNFFISGTLFLLFCRLPGTRPLCQQSETIHFSPCASTSSSSQNLNRLRAEFYKSRKTGITATVGGVIGVPTLTPSQTAHIKKPKKQNIAAVVGGCAGAILLVVVTVLLVYVCLMRVKRFVRRTSETGSSLPSPTAEWARENGSPHIGALSSCQTQNLQQLTMVELEHATSNFSQINVIGEGGFGLVYKGMLQDGSIVAIKRRLHYPSQYFVQEVENIGCICHEHLVKLIGYCQESHQQLLVYDYLPNGNVGNHLYGLPIGKLDIRQRLSIALGAAKGLEYLHCLVPPFPHMNFRTRNVLLDDNLAAKVSDFGLSKLMVEGNRAGSSFGIDCFLDPELRLSNEFSERSDVYSFGVFLLELISGREALDRSQSEPQQNLVIQARGINDLDGFVDKTLRENSMDSVQRMMELALQCIDTCIRRLTMKMVAGELELIQKREMGHQGIGLDRKTLKKLISLSLSADSALSEIAKAMAFRILLVLSISVLLLFNGFCSATLSKESSKKDEDLDDDLSFLLDDSDDEAPISKHSPDLDQFDEYDEDFENYDDFEGSESDPDQQYSPPAVDEKDVVVLKEGNFSDFVEKNRYVMVEFYAPWCGHCQALAPEYAAAATELKGEAVLAKVDATEESELAQNYNVQGFPTVYFFVDGVHKPYPGQRTKDALVTWIRKKTGPGIYNITTAEDAEHILNTESKLVVGFLDSLVGPESDELAAASRLEDDVNFYQTASSDVAKLFHIDPKAKRPALVMLKKEAEKLSHFDGQFTKSAIAEFVFANKLPLVTTFTRESGPLIFENPIKKQLLLFATSNSSEKVIPTFEEAAKLFKGKLIFVYVEMDNEDVGRPVSDYFGVTGDATKVLAYTGNDDAKKYVLDVELTLDSIKAFGEDFLEDKLKPFFKSDPIPETNDGDVKIIVGNNFDEIVLDESKDVLLEIYAPWCGHCQALDPTYNKLAKHLRGIDSLVIAKMDGTTNEHPRAKTDGFPTLLFFPAGNKSFDPITVDTDRTVVAFYKFIKKHASIPFKLQKPVAKSEGVDATKSHESSTDDVKDEL* 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01560 1056 SUPERFAMILY Thioredoxin-like 784 914 IPR036249 -
Eupl05g01560 1056 Gene3D Glutaredoxin 783 911 - -
Eupl05g01560 1056 ProSiteProfiles Thioredoxin domain profile. 561 682 IPR013766 -
Eupl05g01560 1056 NCBIfam protein disulfide-isomerase domain 584 680 IPR005788 GO:0003756
Eupl05g01560 1056 Gene3D Glutaredoxin 574 682 - -
Eupl05g01560 1056 Pfam Protein tyrosine and serine/threonine kinase 188 383 IPR001245 GO:0004672|GO:0006468
Eupl05g01560 1056 CDD PDI_b'_family 806 896 - -
Eupl05g01560 1056 Gene3D Phosphorylase Kinase; domain 1 147 257 - -
Eupl05g01560 1056 Gene3D Transferase(Phosphotransferase) domain 1 258 461 - -
Eupl05g01560 1056 CDD PDI_b_family 685 784 - -
Eupl05g01560 1056 ProSiteProfiles Thioredoxin domain profile. 895 1024 IPR013766 -
Eupl05g01560 1056 FunFam Predicted protein 565 683 - -
Eupl05g01560 1056 PANTHER PROTEIN DISULFIDE ISOMERASE 500 1054 - -
Eupl05g01560 1056 MobiDBLite consensus disorder prediction 1033 1056 - -
Eupl05g01560 1056 Gene3D Glutaredoxin 683 782 - -
Eupl05g01560 1056 FunFam receptor-like serine/threonine-protein kinase NCRK 159 257 - -
Eupl05g01560 1056 ProSitePatterns Thioredoxin family active site. 599 617 IPR017937 -
Eupl05g01560 1056 FunFam protein disulfide-isomerase A2 684 785 - -
Eupl05g01560 1056 ProSiteProfiles Protein kinase domain profile. 185 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01560 1056 SUPERFAMILY Thioredoxin-like 573 682 IPR036249 -
Eupl05g01560 1056 FunFam Protein disulfide-isomerase 786 911 - -
Eupl05g01560 1056 Gene3D Glutaredoxin 912 1025 - -
Eupl05g01560 1056 Pfam Thioredoxin 580 679 IPR013766 -
Eupl05g01560 1056 Pfam Thioredoxin 917 1002 IPR013766 -
Eupl05g01560 1056 MobiDBLite consensus disorder prediction 1038 1056 - -
Eupl05g01560 1056 ProSitePatterns Protein kinases ATP-binding region signature. 191 213 IPR017441 GO:0005524
Eupl05g01560 1056 ProSitePatterns Thioredoxin family active site. 937 955 IPR017937 -
Eupl05g01560 1056 PRINTS Thioredoxin family signature 606 615 - -
Eupl05g01560 1056 PRINTS Thioredoxin family signature 646 657 - -
Eupl05g01560 1056 PRINTS Thioredoxin family signature 598 606 - -
Eupl05g01560 1056 MobiDBLite consensus disorder prediction 555 576 - -
Eupl05g01560 1056 SUPERFAMILY Thioredoxin-like 686 795 IPR036249 -
Eupl05g01560 1056 FunFam Protein disulfide-isomerase 912 1025 - -
Eupl05g01560 1056 SUPERFAMILY Protein kinase-like (PK-like) 167 447 IPR011009 -
Eupl05g01560 1056 Pfam Thioredoxin-like domain 721 891 - -
Eupl05g01560 1056 SUPERFAMILY Thioredoxin-like 913 1024 IPR036249 -
Eupl05g01560 1056 NCBIfam protein disulfide-isomerase 578 1056 IPR005792 GO:0003756
Eupl05g01560 1056 CDD PDI_a_PDI_a'_C 917 1019 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01560 Eupl-Chr5 39289320 39305229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01560 101 446 Receptor kinase-like Gene Family AT1G79620 36.872 3.13e-58 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Eupl05g01560 PK_Tyr_Ser-Thr 3.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01560 K09580 - msin:131240328 885.56