Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01547 ATGTTTTGCAAGAGTAATTCCATCCCAAGATTGACAGTAATGGGCTGCTGTAGTTGCTTTGGATTCATAAGGAAGCCCAAAAGATCATTGAGACCAGCTTCTGTCTCTGGTAGCCGATTTTCCCAGGAGTTTTTGTTGAATGATAATCTAGAATATGTGGATGGTGTTTTATATAATGGTGAATCTACCAATATCCTACGTGGAAGTGATGGTGAGTTGCGAAGCCATGCAAAACATTCTGAAGAGATTCTTTTGCTTAGAGCTCAAAACGGAATGGTATGCAGGGAGGTTCCTGTCAAGGAAACTCGTCAGCTCATTCGCTCAGAGGATGAAAATGGAAATAAAATGGTCAATGAGTACGTTCGGGAGTGTAGGATCGGTTCTGGCAGCTATGGAAAAGTGATTTTGTACAGAAGCAATAAAGATGGAAAGCGGTATGCGATTAAGACTTTTCACAAGTCTCATTTATTAAAGCTGCGAGTAGCACCTTCAGAAACTGCTATGACTGATGTTCTTCGGGAGGTTTTGATCATGAAAACGTTGGACCATCCAAATATAGTCAATCTTATTGAGGTGATTGATGACCCCAACACAGATCAGTTCTACATGGTTCTTGAATATGTAGAAGGCAAGTGGGTCTGTGATGGTTCTGGTCCACCAGGTGGCTTAGGGGAAGTTATTGCTAGAAGATACCTCCGGGACATAGTTGTTGGGCTCATGTATCTCCATGCTCATAATATAGTGCATGGGGACATTAAACCTGATAACCTTTTGGTTACAAGCTCTGGTACGGTGAAGATAGGAGACTTCAGTGTCAGCCAGGTCTTTGAGGACAATAATGATGAGCTTCGCCGATCTCCTGGGACTCCCGTTTTCACTGCACCCGAGTGCTGTTTAGGTCTAACCTACCACGGTAAGGATGCAGACACATGGGCTCTGGGTGTCACTTTATACTGTATGGTGCTGGGTCAATACCCATTTCTTGGAGACACATTACAGGATACATACGACAAGATTGTTAATAACCCTTTATCTATCCCGGAGGCCATCAACCCACTGCTGAAGAATTTACTAGATGGAATTCTCTGCAAAGATCCGAAACAGAGGATGACCTTGGATGCTGTTGTGGGACATCCCTGGGTTGTCGGAGAAGAAGGGCCTATCCCTCAGTATTTATGTCGGTGTAATTGTAAAAGCTTCCAGGAGGAAGAATCTGACGAGAGCAGAAAATATGCTTTCATGATCAGTACTGACTAA 1257 0.4344 MFCKSNSIPRLTVMGCCSCFGFIRKPKRSLRPASVSGSRFSQEFLLNDNLEYVDGVLYNGESTNILRGSDGELRSHAKHSEEILLLRAQNGMVCREVPVKETRQLIRSEDENGNKMVNEYVRECRIGSGSYGKVILYRSNKDGKRYAIKTFHKSHLLKLRVAPSETAMTDVLREVLIMKTLDHPNIVNLIEVIDDPNTDQFYMVLEYVEGKWVCDGSGPPGGLGEVIARRYLRDIVVGLMYLHAHNIVHGDIKPDNLLVTSSGTVKIGDFSVSQVFEDNNDELRRSPGTPVFTAPECCLGLTYHGKDADTWALGVTLYCMVLGQYPFLGDTLQDTYDKIVNNPLSIPEAINPLLKNLLDGILCKDPKQRMTLDAVVGHPWVVGEEGPIPQYLCRCNCKSFQEEESDESRKYAFMISTD* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01547 418 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 83 383 - -
Eupl05g01547 418 Gene3D Transferase(Phosphotransferase) domain 1 110 416 - -
Eupl05g01547 418 SUPERFAMILY Protein kinase-like (PK-like) 117 391 IPR011009 -
Eupl05g01547 418 CDD STKc_LKB1_CaMKK 126 381 - -
Eupl05g01547 418 Pfam Protein kinase domain 121 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01547 418 ProSiteProfiles Protein kinase domain profile. 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01547 418 SMART serkin_6 120 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01547 418 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Eupl05g01547 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Eupl05g01547 418 FunFam Serine/threonine-protein kinase Ssp1 114 216 - -
Eupl05g01547 418 FunFam Serine/threonine-protein kinase GRIK2 110 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01547 Eupl-Chr5 39092932 39111340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01547 126 380 CBL-interacting serine-threonine protein kinases AT5G35410 35.294 1.10e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Eupl05g01547 Pkinase 2.3e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01547 K00908 K07359 nnu:104594834 680.633