Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01545 ATGGCGTCAAACGCTTTGAGGAGCTGCGGAGTTGCAGCTGTGTTTCCGTCTCTCCTCTCGTCTTCAAAGTCGAAATTTACCACCACGGTCGCTCTCCCAGGCGCCAGCACCAATGCCTCATCGCGCTTCACCATGTCTGCAGAGTGGATGCCCGGCGAACCTCGCCCGCCTTACCTCGACGGCTCGGCCCCAGGTGACTTTGGGTTCGACCCCCTTCGGCTTGGTGAAGTCCCTGAGAACCTTGAGAGATTTAAGGAGTCTGAACTTATTCACTGCAGATGGGCTATGCTTGCAGTTCCAGGGATCTTGGTGCCCGAGGCATTGGGCTTGGGCAACTGGGTGAAGGCTCAGGAGTGGGCTGCGGTGCCAGGTGGGCAGGCGACCTACTTAGGCAACCCAGTCCCATGGGGCACCCTCCCAACCATTCTGGTTATCGAATTCATTTCCATTGCCTTTGTGGAGCACCAACGCAGCATGGAGAAAGACCCTGAGAAGAAGAAGTACCCAGGTGGAGCATTTGACCCATTGGGCTACTCCAAGGACCCGGTCAAGCTCAAAGAGTACAAGATCAAGGAGATCAAAAACGGCCGTCTCGCCTTGTTGGCCTTTGTGGGATTCTGCGTCCAACAGTCAGCTTACCCCGGAACAGGACCATTGGAGAATCTGGCTACCCACTTGGCTGATCCATGGCACAACAACATCGGGGACATCCTGATCCCCAAATCTGTTTCGCCGTATTGA 741 0.556 MASNALRSCGVAAVFPSLLSSSKSKFTTTVALPGASTNASSRFTMSAEWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFISIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPVKLKEYKIKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDILIPKSVSPY* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01545 246 Gene3D Chlorophyll a/b binding protein domain 50 236 - -
Eupl05g01545 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 28 236 IPR001344 GO:0009765|GO:0016020
Eupl05g01545 246 FunFam Chlorophyll a-b binding protein, chloroplastic 50 236 - -
Eupl05g01545 246 Pfam Chlorophyll A-B binding protein 56 210 IPR022796 -
Eupl05g01545 246 SUPERFAMILY Chlorophyll a-b binding protein 39 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01545 Eupl-Chr5 39062107 39065294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01545 1 197 Chloroplast and Mitochondria Gene Families AT3G54890 82.828 2.18e-111 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01545 K08907 - nnu:104602638 476.092