Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01538 ATGATGAAGTTGGATTTGTGGCCTTGGAGGGGACTTGTTCTTCCTTTCTTCATCCTCCATTTCTTCTTCGTCGGCCAACTCCTCCTTCTCCAACCCTTAGTTTCTGCCCAAGATGGCAAACCTGGTAATGCTGCTGACTTGTTCAAGAGAGTCTCGGAAAGTATAAGGGTGAAACGTTATAGTGAGGCACTAGATGATCTTAACACTGCTCTAGAGGCAGATCCAACACTTTCAGAAGCATATTGGCATCGTGCATCCGTCCTCCGTCAGTTATGCAGATTTGAGGAATCTGAGAAAAGCTATAAAAAGTTTCTGGAGCTGAAACCAGGAACTTCCACCGCAGAGAAGGAACTTTCTCAATTATTGCAGGCTCAAAGTGCCCTGGACACGGCTTTTAATCTTTACGATGCAGGAGATTTTGCTAAAGCTTTGGATTATATTGTTAAAGTTGTCCTTGTTTTCTCACCGGCATGCTCAAAGGCGAAACTCCATAAAGTGAAGCTGTTGTTAGCAGTGAAAGACTACTCGGGTGCCATCTCAGAGACTGGATATATTCTTAAAGAAGATGAGAGCAATCTGGAGGCACTACTGCTGCGTGGGCGTGCCTACTACTATCTGGCAGATCACGACGTTGCTTTGAGGCATTTCCAAAAAGGTCTCCGCCTAGATCCAGAGCACAGTGAACTGAAAAAAGCATATTTTGGATTGAAAAATCTACTAAAGAAGACTAAAAGTGCAGAAGATAATGTGGATAAGGGAAAGCTACGTTTGGCTGTGGAAGACTTCAAAGGAGCCCTTGCAATTGATCCAAGTCATATTTCACATAATGTTCATCTTCATCTCGGTTTGTGTAAGGCCTTGGTCAAGCTTGGCAGGGGAAAGGATGCCCTGAATAGTTGCACAGAAGCACTTAAGATTGATGACGAGCTTATTGAAGCGTTAGTTCAGAGGGGTGAAGCCAAGCTTTTGACAGAAGATTGGGAAGGTGCTGTGGAAGATCTGAAAGCAGCAGCTCAAAAATCACCTCAGGATATGAATATTCGAGAAGCATTGATGAGGGCTGAGAAATCTTTGAAGTTGAGCAAGCGCAAAGACTGGTACAAGATTCTGGGCATTTCCAAAACTGCATCTATGTCAGAGATTAAACGCGCTTACAAGAAGCTTGCTTTACAGTGGCACCCAGATAAGAATGTTGATAATAGGGAGGAAGCAGAAGACAAATTCCGAGAAATAGCTGCTGCATATGAGGTACTTGGGGATGAAGATAAACGTGTAAGATTCGACAGAGGGGAAGACATTGAAGATATGGGAATGGGTGGCGGTGGCGGTGGCGGTGGTTTCAATCCTTTTGGCGGTGGTGGACAGCAATATACCTTCCACTTTGAAGGAGGCTTCCCTGGTGCTTATGGTGGATTCCAGTTTTGA 1425 0.4449 MMKLDLWPWRGLVLPFFILHFFFVGQLLLLQPLVSAQDGKPGNAADLFKRVSESIRVKRYSEALDDLNTALEADPTLSEAYWHRASVLRQLCRFEESEKSYKKFLELKPGTSTAEKELSQLLQAQSALDTAFNLYDAGDFAKALDYIVKVVLVFSPACSKAKLHKVKLLLAVKDYSGAISETGYILKEDESNLEALLLRGRAYYYLADHDVALRHFQKGLRLDPEHSELKKAYFGLKNLLKKTKSAEDNVDKGKLRLAVEDFKGALAIDPSHISHNVHLHLGLCKALVKLGRGKDALNSCTEALKIDDELIEALVQRGEAKLLTEDWEGAVEDLKAAAQKSPQDMNIREALMRAEKSLKLSKRKDWYKILGISKTASMSEIKRAYKKLALQWHPDKNVDNREEAEDKFREIAAAYEVLGDEDKRVRFDRGEDIEDMGMGGGGGGGGFNPFGGGGQQYTFHFEGGFPGAYGGFQF* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01538 474 SMART tpr_5 311 344 IPR019734 GO:0005515
Eupl05g01538 474 SMART tpr_5 44 77 IPR019734 GO:0005515
Eupl05g01538 474 SMART tpr_5 78 111 IPR019734 GO:0005515
Eupl05g01538 474 SMART tpr_5 193 226 IPR019734 GO:0005515
Eupl05g01538 474 SMART tpr_5 277 310 IPR019734 GO:0005515
Eupl05g01538 474 Pfam Tetratricopeptide repeat 194 226 IPR013105 -
Eupl05g01538 474 Gene3D Tetratricopeptide repeat domain 33 362 IPR011990 GO:0005515
Eupl05g01538 474 ProSiteProfiles TPR repeat region circular profile. 193 226 - -
Eupl05g01538 474 ProSitePatterns Nt-dnaJ domain signature. 408 427 IPR018253 -
Eupl05g01538 474 ProSiteProfiles dnaJ domain profile. 365 431 IPR001623 -
Eupl05g01538 474 FunFam DnaJ domain containing protein 31 362 - -
Eupl05g01538 474 PRINTS DnaJ domain signature 385 400 IPR001623 -
Eupl05g01538 474 PRINTS DnaJ domain signature 403 423 IPR001623 -
Eupl05g01538 474 PRINTS DnaJ domain signature 423 442 IPR001623 -
Eupl05g01538 474 PRINTS DnaJ domain signature 367 385 IPR001623 -
Eupl05g01538 474 CDD DnaJ 365 420 IPR001623 -
Eupl05g01538 474 Gene3D DnaJ domain 363 470 IPR036869 -
Eupl05g01538 474 Pfam Tetratricopeptide repeat 56 110 - -
Eupl05g01538 474 SUPERFAMILY Chaperone J-domain 359 467 IPR036869 -
Eupl05g01538 474 SMART dnaj_3 364 423 IPR001623 -
Eupl05g01538 474 SUPERFAMILY TPR-like 53 360 IPR011990 GO:0005515
Eupl05g01538 474 ProSiteProfiles TPR repeat profile. 78 111 IPR019734 GO:0005515
Eupl05g01538 474 ProSiteProfiles TPR repeat profile. 193 226 IPR019734 GO:0005515
Eupl05g01538 474 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 17 474 IPR044620 -
Eupl05g01538 474 Pfam DnaJ domain 365 428 IPR001623 -
Eupl05g01538 474 FunFam DnaJ subfamily C member 7 363 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01538 Eupl-Chr5 38963800 38970547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01538 357 428 C2H2 Transcription Factor Family AT1G74250 42.105 5.81e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01538 K09523 - ming:122058050 771.155