Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01536 ATGGAGAGACAACCCAATTCAAATATTCAACTCCCTCCTGGATTTAGATTCCACCCATCTGATGAGGAGCTCATCGTTCATTATCTGAGGAACAAGGCGACTTCACGTCCAATTCCTGCATCAATTGTCGCCGAAGTGGATCTCTATAAGTACAACCCATGGGAGCTACCAAAGAAGGCTTTGTTTGGCGACGATGAGTGGTACTTCTTCAGTCCAAGGGATAGGAAGTACCCGAATGGCATGAGACCTAATAGAGCAGCAGCTTCAGGTTATTGGAAGGCAACAGGTACAGACAAACCCATTCTCACTTCTTGCGGATTGCAGAGCATTGGGGTCAAGAAAGCTCTAGTCTTCTACCAAGGTCGCCCCCCGAAGGGAACTAAGACGAATTGGATCATGCATGAGTACAGATTACTTGACAACATGGTCAAGCCATCCAGGCTTAAGGGGTCCATGAGAGTAAGTGACTTCTGCTTATCTCAGACTAGAAACACGGGTTCTCTTACTATTGAAATAAGAAAGTGA 525 0.459 MERQPNSNIQLPPGFRFHPSDEELIVHYLRNKATSRPIPASIVAEVDLYKYNPWELPKKALFGDDEWYFFSPRDRKYPNGMRPNRAAASGYWKATGTDKPILTSCGLQSIGVKKALVFYQGRPPKGTKTNWIMHEYRLLDNMVKPSRLKGSMRVSDFCLSQTRNTGSLTIEIRK* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01536 174 PANTHER NAC TRANSCRIPTION FACTOR 56 11 163 - -
Eupl05g01536 174 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Eupl05g01536 174 ProSiteProfiles NAC domain profile. 11 165 IPR003441 GO:0003677|GO:0006355
Eupl05g01536 174 SUPERFAMILY NAC domain 9 143 IPR036093 GO:0003677|GO:0006355
Eupl05g01536 174 Gene3D NAC domain 20 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01536 Eupl-Chr5 38948196 38948966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01536 1 161 NAC Transcription Factor Family AT1G61110 64.368 1.70e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl05g01536 NAM 2.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01536 - - tcc:18590072 292.352