Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01534 ATGAGCGTGATCGACATTCTCACCCGAGTCGATTCGATCTGCAAGAAATACGACAAGTACGACCTCGACAAGCAGAAGGACCTCAACGTCTCCGGCGACGATGCTTTCGCTCGTCTCTATACAGTCGTCGAGTCCGACATCGATGCAGCTCTTCAGAAATCGGAGGCTGCTTCGAAGGAGAAGAACAGGGCCGCTGCGGTCGCTACGAATGCCGAGATTCGCCGAACCAAGGCTCGATTGCTCGAGGAGGTCCCTAAGTTGCAGAGATTAGCTCTTAAGAAGGTCAAAGGGCTCTCTAGAGAAGAGCTTGTTGCCCGTAATGACATGGTTCTTGCTTTATCGGAGAGAATCCAAGCAATACCAGATGGGACTGCAACTGGAGCCAAACAAACTGGTGGTTGGGCAGCTTCAGCTCCTCGCCAGGAAATTAAGTTTGATTCAACATCAGATGGAAGATTTGATAGTGAATTCTTTCAGCAAACTGAAGAGTCAAGTCAATTTAGGCAAGAATATGAAATGCGGAAAATGAAACAGGATCAAGGTCTGGAAGTTATATCAGAAGGGTTGGATACACTGAAAAATATGGCCCATGACATGAATGAGGAACTGGATAGGCAAGTACCTTTGATTGATGAGATTGATGACAAGGTGGACAGGGCGACCTCTGACCTTCAGAATACTAATGCTAGACTGAAGCAAACTGTTAACCAGCTGAGATCCAGTCGGAACTTCTGTATCGATATTATTCTGTTATGTATTATTTTGGGAATTGCTGCTTATTTATACAATGTATTGAAGAAATGA 804 0.4527 MSVIDILTRVDSICKKYDKYDLDKQKDLNVSGDDAFARLYTVVESDIDAALQKSEAASKEKNRAAAVATNAEIRRTKARLLEEVPKLQRLALKKVKGLSREELVARNDMVLALSERIQAIPDGTATGAKQTGGWAASAPRQEIKFDSTSDGRFDSEFFQQTEESSQFRQEYEMRKMKQDQGLEVISEGLDTLKNMAHDMNEELDRQVPLIDEIDDKVDRATSDLQNTNARLKQTVNQLRSSRNFCIDIILLCIILGIAAYLYNVLKK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01534 267 FunFam Putative syntaxin-71-like 172 233 - -
Eupl05g01534 267 Coils Coil 210 241 - -
Eupl05g01534 267 PANTHER SYNTAXIN 44 254 IPR045242 -
Eupl05g01534 267 CDD SNARE_Qc 177 233 - -
Eupl05g01534 267 Gene3D - 172 233 - -
Eupl05g01534 267 ProSitePatterns Syntaxin / epimorphin family signature. 178 217 IPR006012 GO:0005484|GO:0006886|GO:0016020
Eupl05g01534 267 Pfam SNARE domain 209 258 IPR000727 -
Eupl05g01534 267 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 172 234 IPR000727 -
Eupl05g01534 267 SMART tSNARE_6 167 234 IPR000727 -
Eupl05g01534 267 SUPERFAMILY SNARE fusion complex 165 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01534 Eupl-Chr5 38939375 38944694 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01534 1 266 SNARE and Associated Proteins AT3G09740 76.493 1.03e-151 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01534 K08506 - pda:103711203 434.491