Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01526 ATGGGTTCTTCTCTGGTCTCTCTTTTGGGTTTTGTATTGGTTATCTTGGTCTCTTGTTCTTGTTCTTCTTCTTCAGACCAGGAGAGAGATAGGATCACTGAGTTGCCTGGTCAGCCAGCCAATGTGGGGTTCTCTCAGTACTCTGGTTACGTTACCGTTAATGAACAGGCGGGCCGAGCCTTGTTTTACTGGTTGGTTGAGTCGCCGAAGAGTCGTGGACCTGACTCAAGACCACTCGTTTTGTGGCTCAATGGAGGACCTGGTTGTTCATCTATAGCTTATGGAGCTGCGGAAGAGATCGGACCTTTTCGTATCCGTTCGGATGGGAAGACCCTATTCGTGAATCCGTACGCTTGGCACAATTTGGCAAATTTGCTTTTCCTTGAATCTCCTGCCGGTGTTGGGTTCTCGTATTCTAATACTACGTCGGATTTGTATTCTGCTGGTGATCAGAGAACAGCTGAAGATGCATATGCTTTCCTAGTCAATTGGTTGGAAAGGTTCCCGCAGTACAAGCACAGAGATTTCTACATTGCCGGAGAGAGTTATGCAGGTCACTATGTTCCTCAGTTGTCTCAAATTGTACACGAGAGAAATAAGGGAGTTCAAAATCCTGTTCTTAATTTCAAGGGTTTCTTGGTTGGCAATGCTGTTACCGATGATTACAATGATTATGTGGGCACCTTTGAGTATTGGTGGACCCACGGTTTGATTTCTGATTCTACGTATAAAAATCTGAGAGTTGCCTGTGATTTTGGATCCTCTCAGCACCCTTCGGTTGAATGCATAAAGGCTTTCACCACTGCCGATGCAGAACAAGGAAACATTGATCCATATAGCATATATACGCATCCTTGTAATAATACTGCATCTCTCAGGCGCAACTTAAAGGGGCACTATCCTTGGATGTCCAGATCATATGATCCCTGCACTGAAAGGTATTCTAAGGCGTTCTTCAACCTCCCAGAAGTGCAGAACGCACTTCATGCCAATGTTACTAGGATTTCCTATCCTTGGGAAACATGCAGTGATATTGTTGGGAACTACTGGACGGATTCTCCGAGATCCATGCTTCCTATTTATCAAGAACTTATAGCTGCTGGTCTCAGGATCTGGGTATTCAGTGGTGACACGGATGCAGTGGTGCCTGTGACTGCAACGCGATATTCTATCAATGCTCTCAAGCTACCTACCCTAATCAACTGGTATCCATGGTATGACAATGGAAAGGTTGGTGGATGGAGCCAAGTGTACAAAGGACTGACCTTGGTGACAGTAACAGGCGCCGGTCATGAGGTTCCACTTCACCGTCCTAGACAAGCTTTTATACTGTTTAGATCTTTCTTAGAGAATAAGCCCATGCCCCACTGA 1371 0.4551 MGSSLVSLLGFVLVILVSCSCSSSSDQERDRITELPGQPANVGFSQYSGYVTVNEQAGRALFYWLVESPKSRGPDSRPLVLWLNGGPGCSSIAYGAAEEIGPFRIRSDGKTLFVNPYAWHNLANLLFLESPAGVGFSYSNTTSDLYSAGDQRTAEDAYAFLVNWLERFPQYKHRDFYIAGESYAGHYVPQLSQIVHERNKGVQNPVLNFKGFLVGNAVTDDYNDYVGTFEYWWTHGLISDSTYKNLRVACDFGSSQHPSVECIKAFTTADAEQGNIDPYSIYTHPCNNTASLRRNLKGHYPWMSRSYDPCTERYSKAFFNLPEVQNALHANVTRISYPWETCSDIVGNYWTDSPRSMLPIYQELIAAGLRIWVFSGDTDAVVPVTATRYSINALKLPTLINWYPWYDNGKVGGWSQVYKGLTLVTVTGAGHEVPLHRPRQAFILFRSFLENKPMPH* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01526 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 421 434 IPR001563 GO:0004185|GO:0006508
Eupl05g01526 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Eupl05g01526 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Eupl05g01526 456 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Eupl05g01526 456 SUPERFAMILY alpha/beta-Hydrolases 27 455 IPR029058 -
Eupl05g01526 456 ProSitePatterns Serine carboxypeptidases, histidine active site. 421 438 IPR033124 GO:0004185
Eupl05g01526 456 FunFam Carboxypeptidase 357 451 - -
Eupl05g01526 456 FunFam Carboxypeptidase 26 288 - -
Eupl05g01526 456 Pfam Serine carboxypeptidase 36 451 IPR001563 GO:0004185|GO:0006508
Eupl05g01526 456 Gene3D - 357 450 - -
Eupl05g01526 456 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 438 IPR001563 GO:0004185|GO:0006508
Eupl05g01526 456 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Eupl05g01526 456 Gene3D - 310 346 - -
Eupl05g01526 456 Gene3D alpha/beta hydrolase 26 288 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01526 Eupl-Chr5 38848952 38854055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01526 315 454 Calmodulin-binding Proteins AT2G22960 28.369 2.03e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01526 K16297 - nnu:104594814 820.846