Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01523 ATGGAAATTGATCTGAATCATGCAGTGAAAGAGGGGGAGAAGAATGGATGTTATTATGGAGATTGTGACAAGGGTAGTGGTGTTGGTGGTTGCTGTTCTCTCTCCTCTTCAACTTCTTCTTGTTGTTGTTCTTCAACTTCTGCTGTTTCTTCTATGTCTTCTTCAGTTTATTTTGAGTTGTGGCATGCTTGTGCTGGACCTCTCACATCCCTGCCCAAGAAAGGGAGTGTTGTTGTCTACTTCCCACAAGGTCACTTGGAGCAGGCTGCTTCCTCCTCATCTTTTCCATGCTTGGAGATTCCCACCTTTGGTCTCCAACCCCAGATCTTTTGCAAGGTTGTTAATGTCCAACTACTTGCCAATAAGGAGAATGATGAGGTCTACACACAGGTGACCCTCTTCCCTCAACCAGAGTTGCGGGAGGGGAATTTAGTGGGCAAAGGACATGAGGAGGAGGTGGGGCTGGAGGAGGAGGAGGCTGGAGGTTCACCGAGCAAATCGACGCCTCATATGTTCTGTAAAACACTAACAGCCTCTGATACTAGCACCCACGGTGGCTTTTCTGTTCCTCGTAGAGCTGCAGAAGATTGTTTCCCACAACTAGATTATAAACAGCAAAGGCCCTCTCAGGAGCTCATTGCCAAAGACCTGCATGGAGTGGAATGGAGGTTTCGGCATATTTACAGAGGTCAGCCACGCCGGCATCTGCTTACTACAGGATGGAGTATTTTTGTAAGCCAAAAGAATCTTGTTTCAGGGGATGCAGTGCTCTTTTTGAGGGGTGAAGATGGAGAACTGCGGTTGGGAATTAGAAGAGCTGGTCGAGCTAGAAACAGTCTTCCTAATTCAATTCTTGGTGGCCAGAATATGCATCTCAACATTCTTTCGCCGGTGGCTAATGCAATATCCACCAAGAGCATGTTTCACATTTTCTACAGCCCAAGGGCAAGTCCTGCGGAGTTTGTCATACCCTACCAAAAGTATGTGAAAAGCATCAGGCATCCAGTAGCCATAGGGATGAGGTTCAAAATGAGATTTGAAATGGAAGATACAGCTGAGAGAAGATGCAGTGGTGTAGTAACTGGGATAGGTGATCTGGATCCCTATAGATGGCGTGATTCAAAATGGAGATGCTTAATGGTCAGATGGGATGAAGATGTTGTGAGCGATCATCAAGAACGAGTTTCTCTGTGGGAGATAGAACTCTCTATTTCTCTACCAGCATTGAGTGTCCCATCTGCCCCAAGGCTGAAGAAACTACGGACAGGTCTGCAGTCAACCTCACCCGAAAACCCTGTTACTGCAGGGGGGGATGGGTTCTTGGACTTTGATGAATCAGTGAGATCCTCTAAGGTCTTGCAAGGTCAAGAAAATGTGGGTTTTAGGTCACCTCACTATGGTGGTGACAAGGTAAACCACACATTGGACTTCGAGATGCAAAATCCAGCACACAGAAGTCTTGCATCAACTGGGTTAGCAGAGACTGACATTAGTGAACCTATGCGGGTGCAACCCACCACTTACACAGGCTTTGCGGAATCTGCAAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATATTCCCTTTGAGATCCCTGCATGGAAGAACCGAGTTCAACCACATAGCTTGGGAAAAGAGCAATCTTGGTTGCAATATGTTCAACATGTACCACAGACCCAACCCCAATTTCTACCCTTTTGCGTCTGATGATGTTGGAACCATTTACATGCCGTATAACGACAAATACAAAGCAAACCTTGATCCCATAATGCAACCATATATGACCAATTTCCAAGGAGGGAGTGTCCAGTCCAACATGCCTTCTATCCAAAGAAGGTTCCCTGGTATTATTAGGGATGAAGTATGCAAACCAAGCACGCCTAATCTCGTGAAGGAACAGAGGCCAGCAGATAATTTATCTACTCCCGCTTCTATCAACACAGATCCAAAAAATCAGAAAGGCGAAGTTGGCGATGGGACTAAAGCCAGCTGTAAACTGTTTGGGTTTTCCTTGACTGGAGAAATTCCCATTCCAAACTCACAGAACTCTAGCAGGAGGAGTTGTACTAAGGTTCACAAGCAAGGCAACCTGGTTGGAAGAGCTGTTGATCTCTCGAGACTGAATGGCTATGATGACCTGCTAATTGAACTAGAGCGGCTATTTAACATGGAAGGCCTTCTGTGCAATCCTGAGAAAGGATGGCAGGTTGTTTACACAGACAGCGAGAACGATATGATGGTCGTTGGGGATGATCCTTGGCACGAGTTCTGTGATGTCGTGTCCAAGATTCATATATTTACACAAGAGGAAGTGGAGAAGATGACGACTGGGATGATCAGCGATGACACTCATAGTTGTTTGGAAGAAGCACCAGCAGTAATGGATGTGTCAAAATCTTCTTCAGTGGGTCAGCCGGATTCTTCCCCAACGGTAATTAGGATTTGA 2445 0.4601 MEIDLNHAVKEGEKNGCYYGDCDKGSGVGGCCSLSSSTSSCCCSSTSAVSSMSSSVYFELWHACAGPLTSLPKKGSVVVYFPQGHLEQAASSSSFPCLEIPTFGLQPQIFCKVVNVQLLANKENDEVYTQVTLFPQPELREGNLVGKGHEEEVGLEEEEAGGSPSKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPQLDYKQQRPSQELIAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEDGELRLGIRRAGRARNSLPNSILGGQNMHLNILSPVANAISTKSMFHIFYSPRASPAEFVIPYQKYVKSIRHPVAIGMRFKMRFEMEDTAERRCSGVVTGIGDLDPYRWRDSKWRCLMVRWDEDVVSDHQERVSLWEIELSISLPALSVPSAPRLKKLRTGLQSTSPENPVTAGGDGFLDFDESVRSSKVLQGQENVGFRSPHYGGDKVNHTLDFEMQNPAHRSLASTGLAETDISEPMRVQPTTYTGFAESARFQKVLQGQEIFPLRSLHGRTEFNHIAWEKSNLGCNMFNMYHRPNPNFYPFASDDVGTIYMPYNDKYKANLDPIMQPYMTNFQGGSVQSNMPSIQRRFPGIIRDEVCKPSTPNLVKEQRPADNLSTPASINTDPKNQKGEVGDGTKASCKLFGFSLTGEIPIPNSQNSSRRSCTKVHKQGNLVGRAVDLSRLNGYDDLLIELERLFNMEGLLCNPEKGWQVVYTDSENDMMVVGDDPWHEFCDVVSKIHIFTQEEVEKMTTGMISDDTHSCLEEAPAVMDVSKSSSVGQPDSSPTVIRI* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01523 814 Pfam B3 DNA binding domain 172 273 IPR003340 GO:0003677
Eupl05g01523 814 Gene3D - 170 273 IPR015300 -
Eupl05g01523 814 Gene3D - 336 407 - -
Eupl05g01523 814 MobiDBLite consensus disorder prediction 149 168 - -
Eupl05g01523 814 CDD B3_DNA 170 272 IPR003340 GO:0003677
Eupl05g01523 814 ProSiteProfiles B3 DNA-binding domain profile. 172 274 IPR003340 GO:0003677
Eupl05g01523 814 ProSiteProfiles PB1 domain profile. 686 768 IPR000270 GO:0005515
Eupl05g01523 814 MobiDBLite consensus disorder prediction 627 658 - -
Eupl05g01523 814 Pfam Auxin response factor 298 379 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Eupl05g01523 814 FunFam Auxin response factor 170 274 - -
Eupl05g01523 814 SUPERFAMILY CAD & PB1 domains 684 765 - -
Eupl05g01523 814 Gene3D - 681 775 - -
Eupl05g01523 814 SUPERFAMILY DNA-binding pseudobarrel domain 164 294 IPR015300 -
Eupl05g01523 814 FunFam Auxin response factor 335 407 - -
Eupl05g01523 814 Pfam AUX/IAA family 733 771 IPR033389 -
Eupl05g01523 814 MobiDBLite consensus disorder prediction 631 653 - -
Eupl05g01523 814 FunFam Auxin response factor 681 775 - -
Eupl05g01523 814 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 54 775 IPR044835 GO:0003677|GO:0006355|GO:0009725
Eupl05g01523 814 SMART B3_2 172 274 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01523 Eupl-Chr5 38804631 38813161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01523 53 814 B3 DNA Binding Superfamily AT5G60450 60.728 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Eupl05g01523 B3 1.4e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01523 - - nnu:104602663 1201.81