Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01517 ATGGCGGACGACTCTGATTTCGCTGATAAGGTCCCTCCGTCGTTTGAACATATGGGAAATGTGATTAAGGATGTCGAAGCTAAGGGGTTCAACCCAGGGTTGATAGTTCTGCTTGTTGTGGTGGGACTACTACTGATCTTTCTTGTCGGGAATTACATTCTCTACATATATGCTCAGAAAACCCTTCCACCAAGGAAAAAGAAGCCAGTTTCCAAAAAGAAGATGAAGAAAGAGAGGCTGAAGCAAGGTGTCTCAGCACCAGGAGAGTAG 270 0.4519 MADDSDFADKVPPSFEHMGNVIKDVEAKGFNPGLIVLLVVVGLLLIFLVGNYILYIYAQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01517 89 PANTHER DNA-BINDING PROTEIN S1FA2 1 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Eupl05g01517 89 MobiDBLite consensus disorder prediction 65 79 - -
Eupl05g01517 89 Pfam DNA binding protein S1FA 25 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Eupl05g01517 89 MobiDBLite consensus disorder prediction 64 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01517 Eupl-Chr5 38713448 38718949 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Eupl05g01517 S1FA 7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01517 - - ming:122080659 144.05