Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01510 ATGGATTTGGTATCCGGTTGCAGGGACAAGTTGGCATACTTCCGAATAAAAGAGCTTAAGGATGTCCTCACTCAGCTCGGTCTTGCAAAGCAAGGAAAAAAGCAGGACCTTGTGGACAGAATTTTAGCGGTGCTTTCTGATGAACAAGTCTCCAAGATGCATGGTTGGGCAAAGAAAAATTCTATTGGGAGAGAAGGAGTAGTGAAAATAATTGATGAGATTTACAGAAAAATGGTTCCTGGGGCTACTGATTTAGCATCGAAGGGACACAGTGGTTCGGATATCAACAATGTGAAGCTTAAAGAGGAAGTTGAAAATTCTTTCCCATTGGATATGAAGGTTCGCTGTCCTTGTGGAAGTTCATTGCCTACTGAGTCAATGATTCAGTGCGATGATCCACGATGTCATGTGTGGCAACACATTAGTTGCGTTATTATTCCGGAGAAACTCATGGAGGGTGTTCCACCAGTTCCACCTCAATTTTACTGTGAAATCTGTCGAATCAGTCGGGCAGACCCTTTTTGGCTGAAAATAGCAGATCCATTACTTCCTGTGAAGTTGACTGCTTCAAATCTTCCAACAGATGGGACGAACCCGACGCAGAATGTGGAAAAAACATTTCAACTACCAAGGTTCGACAAAGAGTTATTACTTATGACAGAATATGATATTCAGGCTTGGTGTATTCTTCTCAATGATAAGGTTCCTTTTAGGATGCAGTGGCCACAATATGCAGAGCTGCACTTCAATGGTGTGCAAATTCGGACGATTAATAGGCCTGGCCAGCAGTTGTTAGGAGCCAATGGTCGTGATGACGGTCCATTACTCTCATCATATATCAGGGAGGGGATTAATAAGATTTCTTTATCAGGATGTGATGCTCGTATTTTCTGTTTTGGGGTCAGAATTGTAAAGCGGCGTACGGTTCAAGAGGTTCTCAACTTAATTCCCAAGGAACCAGATGGTGAGCATTTTGAAGATGCTCTTGCCCGCATTTGCCGTTGCATTGGTGGTGGAAATGCTACAGAAAATCCGGATAGTGACAGTGATTTGGAAGTCGTTGCGGAATCCGTTACCGTCAATCTGCGCTGCCCTATGAGCGGGTCCAGAATTAAGACTGCTGGCAGGTTCAAACCTTGTGTTCACATGGGCTGTTTTGATCTGGAAACTTTTGTGGAACTTAACCAACGGTCTAGGAAGTGGCAGTGTCCCATTTGCCTCAAGAACTATTCCTTGGAGAATATCATCATTGACCCATATTTCAATCGCATCACGACTATGATGCAGGATTGTGGAGAAGATGTAAACGAGATAGATGTCAAGCCCGACGGTTGTTGGCGCGCAAAGAATGAGAATGAGCATAGGGATCTTGCACAGTGGCACTTCCCTGATGGTTCACTTTGTGTCGCTACGGATGAAGAAATGAAACCATACTTGGAAACCTTAAAGCAGATCAAACAGGAAGGTGTTTCGGAAGGACATACTGGTTTGAAACTAGGAATCAAGAAGAACCGAAATGGGATTTGGGAAGTTAGCAAGCCTGAAGATATGCAGACCCTATCTTCTGGAAACCAATTACAAGAGAAATTTGAAAAGCATTGTCAAAAGGTCATGCCTATGAGCAGCAGTGCTACTGGAAGTTGTCGAGATGGTGAAGATCCAAGTGTTAATCAGGATGGTGGTGGGCATTTTGATTTCTCTACCAACAATGGAAATGAGCTTGATTCTATTTCTCTCTTCGACCCAGCTTATGGATATGGCAGCAGAATTTCTTCTGCACCGATTGGGGATGCAAATGTCATTGTTCTTAGTGATTCAGAAGAAGAAAATGAAAATCTAATTTCTCCTGAAACTGTCTACGAGACTGGTCAAGCTGATGTCAATAGCATTCCTTTCTCCATTCCCCCTCCTGGAGTTCCAGACTCGTACCCCGAAGATCCTGGTCTTGTTACTGGCGGTGGTTCATGCCTAGGTCTCTTTAACGGTACTGATGATGACTTCGGGATGCCTCTCTGGCCATTGCCTTCTGGTACTCAAACTGGTCCTGGTTTCCAACTATTTGGTACTGAGGCAGACGTCTCTGATACTTTAATCAATGTGAAGCATACTTCTGTTACCTGTCCCACATCCATGAATGGCTATGCATTGGCTCCAGACACAGCTCTTGGATCAGCTACACAAGTCCCAGAATCTATTTGTCATTCCAACTCAGACATAAATGGTGGCTTGGTTGATAATCCCTTGGCATTTGGTGGGGAAGACCCCTCTCTGCAAATTTTCCTTCCCTCTCGTCCTGCTGGCGCTTCTGTGCAAGCTGATTTGAGAGACCAATCTGACATGTCAAATGGTGTACGTACTGAGGACTGGATTTCTCTTAGGCTTGGTGGCGGAGACGGCGGCGGTGATCATGGTGAGTCAGCAGATACAAATGGTTTGAATTCAAGACACCAGTTTGCATCCAAGGAGGGTAGGATGGAATCTTTAGCGACCACTGCTTCTTTGCTTTTGAGTATGAACGAGGATAAGTCTGACAGGACAACCACAAAGAAGCAAAGGTCTGAAAGCCCTTTCTCATTTCCTCGCCAGCCACGGTCTGTACGGCCACGGTTGTATCTCTCGATAGATACAGACTCCGATTAG 2640 0.447 MDLVSGCRDKLAYFRIKELKDVLTQLGLAKQGKKQDLVDRILAVLSDEQVSKMHGWAKKNSIGREGVVKIIDEIYRKMVPGATDLASKGHSGSDINNVKLKEEVENSFPLDMKVRCPCGSSLPTESMIQCDDPRCHVWQHISCVIIPEKLMEGVPPVPPQFYCEICRISRADPFWLKIADPLLPVKLTASNLPTDGTNPTQNVEKTFQLPRFDKELLLMTEYDIQAWCILLNDKVPFRMQWPQYAELHFNGVQIRTINRPGQQLLGANGRDDGPLLSSYIREGINKISLSGCDARIFCFGVRIVKRRTVQEVLNLIPKEPDGEHFEDALARICRCIGGGNATENPDSDSDLEVVAESVTVNLRCPMSGSRIKTAGRFKPCVHMGCFDLETFVELNQRSRKWQCPICLKNYSLENIIIDPYFNRITTMMQDCGEDVNEIDVKPDGCWRAKNENEHRDLAQWHFPDGSLCVATDEEMKPYLETLKQIKQEGVSEGHTGLKLGIKKNRNGIWEVSKPEDMQTLSSGNQLQEKFEKHCQKVMPMSSSATGSCRDGEDPSVNQDGGGHFDFSTNNGNELDSISLFDPAYGYGSRISSAPIGDANVIVLSDSEEENENLISPETVYETGQADVNSIPFSIPPPGVPDSYPEDPGLVTGGGSCLGLFNGTDDDFGMPLWPLPSGTQTGPGFQLFGTEADVSDTLINVKHTSVTCPTSMNGYALAPDTALGSATQVPESICHSNSDINGGLVDNPLAFGGEDPSLQIFLPSRPAGASVQADLRDQSDMSNGVRTEDWISLRLGGGDGGGDHGESADTNGLNSRHQFASKEGRMESLATTASLLLSMNEDKSDRTTTKKQRSESPFSFPRQPRSVRPRLYLSIDTDSD* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01510 879 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
Eupl05g01510 879 SUPERFAMILY SAP domain 1 54 IPR036361 -
Eupl05g01510 879 CDD PHD_Bye1p_SIZ1_like 115 166 - -
Eupl05g01510 879 ProSitePatterns Zinc finger PHD-type signature. 116 166 IPR019786 -
Eupl05g01510 879 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 172 IPR013083 -
Eupl05g01510 879 CDD SP-RING_Siz-like 361 410 IPR031141 -
Eupl05g01510 879 FunFam E3 SUMO-protein ligase SIZ2 334 448 - -
Eupl05g01510 879 SMART sap_9 11 45 IPR003034 -
Eupl05g01510 879 MobiDBLite consensus disorder prediction 791 813 - -
Eupl05g01510 879 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 337 449 IPR013083 -
Eupl05g01510 879 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 669 - -
Eupl05g01510 879 SMART PHD_3 115 167 IPR001965 -
Eupl05g01510 879 FunFam E3 SUMO-protein ligase SIZ1 1 68 - -
Eupl05g01510 879 ProSiteProfiles Zinc finger SP-RING-type profile. 349 430 IPR004181 GO:0008270
Eupl05g01510 879 MobiDBLite consensus disorder prediction 837 879 - -
Eupl05g01510 879 SUPERFAMILY FYVE/PHD zinc finger 111 170 IPR011011 -
Eupl05g01510 879 Pfam MIZ/SP-RING zinc finger 360 408 IPR004181 GO:0008270
Eupl05g01510 879 Pfam SAP domain 14 42 IPR003034 -
Eupl05g01510 879 Gene3D SAP domain 1 77 IPR036361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01510 Eupl-Chr5 38597203 38646449 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Eupl05g01510 zf-MIZ 1.2e-18 CL0229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01510 - - nnu:104594792 1349.73