Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01500 ATGGGGAAGAAAGGGAACTGGTTTGTTGCAGTAAAGAAAGCTTTCAGCCCTGAATCCAAGGATAAGAAAGCTCAGAAAACCAGTAAGTCGAAGAATAAATGGGGGTCTGGAAAACAGAAATACCAAGATCCCTCTTCTTCCACAGTAGAATCTGTCCCAGCACCTCCTCCGCCCCCATCTGAAGAGGTGAAACTGACAGAAATAGAGAATGAACAGAGCAAGCACGCTGACTCTGCACCGCTTACCACTACTGTGGCCGCTGAAGCCACCGTTTCCAATGCTCACGCAGCTGCAGAGGTCGTTAGGCCCACGACTGTGACACGGTACTCTGGTAAATCAAAGGAGGAAGTGGCCGCAATCAAGATTCAAACGGCATTCCGAGGATACCTGGCAAGGAGGGCATTGCGGGCTTTGAGAGGGCTGGTTAGGTTGAAAACGCTGATACATGGGCATTCTGTCAAACGCCAATCCACGACCACCCTACGATGCATGCAGACCCTGGCGCGTGTGCAGTCTCAAATCCGTGTAAGGAGGATTAGAATGTCTGAAGAGAACCAGGCTCTCCAGCGGCAGCTCCAGCTGAAGCGCGAGAAGGAGCTTGAAAACTTGAGAGCCTCTATGGGAGAGGAATGGGATGACAGTTTTCAATCCAAGGAGCAAATTGAAGCAAACCTATTAAGCAAACAAGAGGCTGCCATGAGAAGAGAAAGAGCACTGGCTTATGCATTCTCTCATCAGCAAATGTGTAAAAATTCTTCGCAGTCTGCAAACCCAATGTTCATGGACCCAAATAATCCCCACTGGGGATGGAGTTGGTTGGAACGATGGATGGCCACCCGTCCATGGGAGAGCCGAAGCATGACAGATAAAGAGCCCAATGACCACTCATCTGTAAAGAGTGCAAGCTACAGCATTGGAGGAGGAGAAATCAGCAAAGCATATGCCCGCCGTGAACTTAAGGTAGAAAAGCCTTCACCAACAGCCCAGAAATCGAATCGCCAGTCACTCTTGACTCCCCCTTCCAAGACGGCATCGTCATTATCAGTAGCTAGGAAATTAAGGTCTGCGAGCCCAAGAGGAGGAGGCTTGTGGGCCCCAGATGACGACTCAAGGAGCATGCTTAGCATGCAGTCAGAGCAGCATCGGCGGCACAGCATTGCTGGGTCATCGGTGAGGGACGACGAGAGCTTGGCGAGCTCCCCAGCAGTCCCAAGCTATATGGTACCCACAGAGTCTGCAAGGGCCAAGGCCCGACTGCAGAGCCCATTGGGGGTCGAGAGGCAAGAGACACTGGAGAGGGGTTCGGCAGGTTCCGTGAAGAAGCGGCTGGCTTTTGCAGCTTCCCCAGCTAGGCCGAGGCGACATTCGGGTCCACCCAAGGTGGATAGCAGCTCCATCAAGGACATTGGTGTACACACAGAGCAGAGTGTGAGCAATGGAGGGAGCAGGTAG 1452 0.5234 MGKKGNWFVAVKKAFSPESKDKKAQKTSKSKNKWGSGKQKYQDPSSSTVESVPAPPPPPSEEVKLTEIENEQSKHADSAPLTTTVAAEATVSNAHAAAEVVRPTTVTRYSGKSKEEVAAIKIQTAFRGYLARRALRALRGLVRLKTLIHGHSVKRQSTTTLRCMQTLARVQSQIRVRRIRMSEENQALQRQLQLKREKELENLRASMGEEWDDSFQSKEQIEANLLSKQEAAMRRERALAYAFSHQQMCKNSSQSANPMFMDPNNPHWGWSWLERWMATRPWESRSMTDKEPNDHSSVKSASYSIGGGEISKAYARRELKVEKPSPTAQKSNRQSLLTPPSKTASSLSVARKLRSASPRGGGLWAPDDDSRSMLSMQSEQHRRHSIAGSSVRDDESLASSPAVPSYMVPTESARAKARLQSPLGVERQETLERGSAGSVKKRLAFAASPARPRRHSGPPKVDSSSIKDIGVHTEQSVSNGGSR* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01500 483 Coils Coil 178 198 - -
Eupl05g01500 483 Pfam Protein of unknown function (DUF4005) 397 457 IPR025064 -
Eupl05g01500 483 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Eupl05g01500 483 MobiDBLite consensus disorder prediction 325 352 - -
Eupl05g01500 483 SMART iq_5 114 136 IPR000048 GO:0005515
Eupl05g01500 483 MobiDBLite consensus disorder prediction 468 483 - -
Eupl05g01500 483 MobiDBLite consensus disorder prediction 30 49 - -
Eupl05g01500 483 MobiDBLite consensus disorder prediction 321 483 - -
Eupl05g01500 483 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Eupl05g01500 483 PANTHER IQ-DOMAIN 5-RELATED 1 463 - -
Eupl05g01500 483 MobiDBLite consensus disorder prediction 1 62 - -
Eupl05g01500 483 Gene3D iswi atpase 112 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01500 Eupl-Chr5 38462243 38467226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01500 1 466 IQD Protein Family AT5G03040 51.245 4.44e-144 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01500 - - msin:131243370 665.996