Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01486 ATGGACTCAAATGACACCACCACCACCACCACCTCCTCTCCTCTCTCTTTTTCTCCTTCTTCATCTTCTCCATCTCAATCTTCTCTTCCTCCAACTCCTACTCCTATTGTAATCAGCCCTTGTGCTGCCTGTAAGATTCTCCGTCGAAGATGCGTCGAAAAATGCGTACTCGCGCCATATTTCCCACCGACGGAACCACTCAAGTTTACAACTGCGCATAGAGTATTCGGTGCAAGCAACATCATCAAATTCTTACAGGAACTTCCAGAGACTCAAAGGGCTGATGCAGTGAGTAGTATGGTTTACGAGGCGAACGCGCGGATTAGAGACCCGGTGTATGGGTGTGCGGGGGCGATATGCCAGCTTCAGAAACAAGTGAACGAGCTGCAAACACAATTGGCTAAGTCACAAGCTGAGCTTGTGAACATGCAATGCCAACAAGCGAACCTAGTGGCTTTAATTTGCATGGCTCAACAACCATCGTCGCAACAGTCATTCGACAACTTCATCAACAATCCTCACAATTTCCAGATTAATGGAGGATTCTTAGATGATAATAATATAGGATCAGCGTGGGAACCACTTTGGACATGA 594 0.4663 MDSNDTTTTTTSSPLSFSPSSSSPSQSSLPPTPTPIVISPCAACKILRRRCVEKCVLAPYFPPTEPLKFTTAHRVFGASNIIKFLQELPETQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVNELQTQLAKSQAELVNMQCQQANLVALICMAQQPSSQQSFDNFINNPHNFQINGGFLDDNNIGSAWEPLWT* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01486 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 39 156 - -
Eupl05g01486 197 Coils Coil 126 146 - -
Eupl05g01486 197 ProSiteProfiles LOB domain profile. 39 140 IPR004883 -
Eupl05g01486 197 MobiDBLite consensus disorder prediction 1 25 - -
Eupl05g01486 197 Pfam Lateral organ boundaries (LOB) domain 40 137 IPR004883 -
Eupl05g01486 197 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01486 Eupl-Chr5 38233074 38234407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01486 36 197 AS2 family AT1G07900 67.066 3.49e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl05g01486 LOB 4e-41 No_clan