Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01468 ATGCAAGGAGGTGGTGGTGGTGCTGCTGCTGCTGCTGCAACCGACGTTCCTCATAACATGAATTCCTCTCACTTAAGCGATTTTCCGGCCGTTCTGACACATGGAGGCCGGTTCGTTCAGTACAACATCTTCGGCAATCAGTTCGAGATCACGGCTAAGTATCGGCCTCCGATAATGCCCATCGGACGTGGTGCTTACGGAATCGTCTGCTCGGTGTTGAATTCGGAGACGAATGAGATGGTTGCAATCAAGAAGATAGCCAATGCATTCGATAATCATTTGGACGCAAAACGAACGCTCCGCGAGATTAAACTCCTAGGTCATTTAGACCATGAGAATGTCATAGGTATAAGAGATGTGATCCCACCACCTATACCAAGGACATTTGCCGATGTCTATATTGCCACTGAACTCATGGACACTGATCTCCATCAAATAATTCGCTCCAATCAAGATCTATCGGAGGAGCACTGTCAGTATTTCCTGTATCAGCTTCTTCGTGGGCTGAAATATATTCATTCTGCGAATGTCATTCATAGAGATTTAAAACCGAGCAACCTCTTGTTGAATGCAAACTGTGATCTGAAGATTTGTGATTTCGGTCTGGCTCGCCCAACTTCGGAAAATGAGTTTATGACAGAATATGTTGTCACTAGATGGTACAGGGCACCAGAATTGTTGCTGAATTCTACAGATTACACTGCTGCAATTGATGTGTGGTCTGTGGGCTGCATCTATATGGAGCTGATGAATAGGAAACCGTTGTTTCCCGGTAGAGATCATGTACATCAGATGCGTTTACTGACAGAGCTTCTTGGCACACCCAATGAGGCTGAGCTTGGATTTGTTCAGAATGAAGAAGCGAAAAGGTATATCCGGCAACTACCACAACATCCTCGCCAGCCTTTTGCAACGGTTTTCCCGCACGTCAACCCTGCTGCTCTTGATCTCATTGAGAGAATGCTGACATTTGATCCCACTAGAAGAATTACAGTTGAAGAAGCACTGGCTCACCCTTACCTTGCAAGATTACATGATGTAGCTGACGAACCGGTTTGCTTAGAGCCTTTCTCCTTTGAATTTGAGCAACAGGCCTTAACTGAAGAGCAGATGAAGGAGATGATATACAGGGAGGCCATAGCACTAAATCCTAGTTATGTACATTGGTAA 1170 0.453 MQGGGGGAAAAAATDVPHNMNSSHLSDFPAVLTHGGRFVQYNIFGNQFEITAKYRPPIMPIGRGAYGIVCSVLNSETNEMVAIKKIANAFDNHLDAKRTLREIKLLGHLDHENVIGIRDVIPPPIPRTFADVYIATELMDTDLHQIIRSNQDLSEEHCQYFLYQLLRGLKYIHSANVIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYRAPELLLNSTDYTAAIDVWSVGCIYMELMNRKPLFPGRDHVHQMRLLTELLGTPNEAELGFVQNEEAKRYIRQLPQHPRQPFATVFPHVNPAALDLIERMLTFDPTRRITVEEALAHPYLARLHDVADEPVCLEPFSFEFEQQALTEEQMKEMIYREAIALNPSYVHW* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01468 389 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 53 343 - -
Eupl05g01468 389 Gene3D Transferase(Phosphotransferase) domain 1 139 368 - -
Eupl05g01468 389 FunFam Mitogen-activated protein kinase 139 369 - -
Eupl05g01468 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Eupl05g01468 389 Gene3D Phosphorylase Kinase; domain 1 38 378 - -
Eupl05g01468 389 CDD STKc_TEY_MAPK 48 384 - -
Eupl05g01468 389 ProSiteProfiles Protein kinase domain profile. 55 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01468 389 SUPERFAMILY Protein kinase-like (PK-like) 60 349 IPR011009 -
Eupl05g01468 389 SMART serkin_6 55 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01468 389 Pfam Protein kinase domain 60 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01468 389 ProSitePatterns MAP kinase signature. 90 193 IPR003527 GO:0004707|GO:0005524|GO:0006468
Eupl05g01468 389 ProSitePatterns Protein kinases ATP-binding region signature. 61 85 IPR017441 GO:0005524
Eupl05g01468 389 FunFam Mitogen-activated protein kinase 40 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01468 Eupl-Chr5 37994571 38000494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01468 19 386 MAP Kinase Gene Family AT3G45640 81.793 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Eupl05g01468 Pkinase 1.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01468 K20536 - nnu:104594741 694.886