Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01462 ATGATGTTGGATCTTAATGTTGTTGTATCGACAGAATCGATATGCGATGAAGAAGAGATCATGATGGAGAAACTTCCGGAAGGTTCTGGTGGAGGTCAAATGGTCGAGTCCGGGACTTCGAATTCCTCCGTCGTGAATGCTGAAGCTTCTAGCAATGGCGGCGACGAGGACTCCTGCTCTACTCACACCAAGCGTAGCAGTGGTGGTGATCTATTTGCCTTCGACTTTGATATCTTAAAGAAGAACATCGGTAGTGATACCATTGCTGTTGAAGATGACGAGGATGATAACGGGAATCGGAATCTGCAGTCGGGTTTCATTACGAAGCAGCTTTTTCCGGTGAGTGCCGACGATGCTCCTGGGTTCCGGTCGTTGGGGTATTCTTTGGCTTCTTCGTCGCGGCCGCATTGGATGGATCTGTCATTCTGCCAGGCCGACGCCGGTAGGCAGCCGGAGGTGAAGGTCTTGCAGCAGCTGCCGCAGCAACCGCAGCAGGTGAAGAAAAGTCGACGGGGGCCGAGGTCTCGGAGTTCTCAGTATCGTGGAGTTACATTTTATCGACGAACAGGGAGATGGGAATCGCATATCTGGGATTGTGGGAAACAAGTATATTTGGGTGGATTTGACACAGCTCATGCTGCAGCTAGAGCATATGATCGAGCTGCAATTAAGTTCCGCGGGGTTGACGCCGACATCAATTTTACTCTCGGTGACTACGATGAAGATCTGAAACAGATGAGAAACCTAACCAAGGAAGAGTTCGTGCACATCCTGCGTCGCCATAGCACCGGATTCTCAAGGGGGAGTTCAAAATACAGAGGGGTGACGCTTCACAAATGTGGTCGATGGGAAGCTCGAATGGGACAATTCCTCGGCAAGAAGTATATATATCTTGGGCTATTCGACAGCGAACTAGAAGCCGCAAGGGCTTACGACAAGGCGGCTATCAAATGTAATGGAAGGGAAGCAGTCACCAATTTTGAGCCGAGTACATATCAAGGGGAGATAATTTCTGAGGCCGACAATGGAGGCACCTCCCACGATCTTGACCTGAATTTGGGGATTTCTCCTCCCACTTTAGCTGACGGTCCAAAGGTGAGGGACATTGTTGGGGGCTCCCATTTCCCTTGCGGCCCATTGCACATGTCCGATGTCAGGAGAGCAACGATGGAGAACCCTGATTCAGAAACAGTGAGTGGTCAAACCCACCATGGCCTAGCAATGGCATCCGAGCACCCTCCCATGTGGACTGGTGTATATCCTAGTTTCTTTCCCAGTTATGAGGAAAGAGCGATAGAGAAGAGGGTAAAATTAGGTTCACCGGGACTCTCAAACTGGGCATGGCAAATGCATGGTCAAAGCGGCAGCGCAACCTCAATGCCACTGTTCTCTACTGCAGCATCATCAGGATTCTCTTCTTCGACTGCCACTGCTTCATCAGCTGCCCTTCTTCCACAACACCCTCTGAATTCAAACATGACCCATTCACGCCATTACCCGCCTCCGTCCACTGCCACCACCAAAACCTCACTCTACTATTACCAAAGCTGA 1551 0.5042 MMLDLNVVVSTESICDEEEIMMEKLPEGSGGGQMVESGTSNSSVVNAEASSNGGDEDSCSTHTKRSSGGDLFAFDFDILKKNIGSDTIAVEDDEDDNGNRNLQSGFITKQLFPVSADDAPGFRSLGYSLASSSRPHWMDLSFCQADAGRQPEVKVLQQLPQQPQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFTLGDYDEDLKQMRNLTKEEFVHILRRHSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSELEAARAYDKAAIKCNGREAVTNFEPSTYQGEIISEADNGGTSHDLDLNLGISPPTLADGPKVRDIVGGSHFPCGPLHMSDVRRATMENPDSETVSGQTHHGLAMASEHPPMWTGVYPSFFPSYEERAIEKRVKLGSPGLSNWAWQMHGQSGSATSMPLFSTAASSGFSSSTATASSAALLPQHPLNSNMTHSRHYPPPSTATTKTSLYYYQS* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01462 516 FunFam AP2-like ethylene-responsive transcription factor 178 237 - -
Eupl05g01462 516 CDD AP2 270 330 IPR001471 GO:0003700|GO:0006355
Eupl05g01462 516 SUPERFAMILY DNA-binding domain 178 235 IPR016177 GO:0003677
Eupl05g01462 516 CDD AP2 179 234 IPR001471 GO:0003700|GO:0006355
Eupl05g01462 516 FunFam AP2-like ethylene-responsive transcription factor 270 330 - -
Eupl05g01462 516 Pfam AP2 domain 270 320 IPR001471 GO:0003700|GO:0006355
Eupl05g01462 516 Pfam AP2 domain 179 227 IPR001471 GO:0003700|GO:0006355
Eupl05g01462 516 SUPERFAMILY DNA-binding domain 270 329 IPR016177 GO:0003677
Eupl05g01462 516 MobiDBLite consensus disorder prediction 25 65 - -
Eupl05g01462 516 Gene3D AP2/ERF domain 270 329 IPR036955 GO:0003700|GO:0006355
Eupl05g01462 516 Gene3D AP2/ERF domain 178 236 IPR036955 GO:0003700|GO:0006355
Eupl05g01462 516 MobiDBLite consensus disorder prediction 486 509 - -
Eupl05g01462 516 PRINTS Ethylene responsive element binding protein signature 272 283 IPR001471 GO:0003700|GO:0006355
Eupl05g01462 516 PRINTS Ethylene responsive element binding protein signature 310 330 IPR001471 GO:0003700|GO:0006355
Eupl05g01462 516 ProSiteProfiles AP2/ERF domain profile. 179 235 IPR001471 GO:0003700|GO:0006355
Eupl05g01462 516 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 144 367 - -
Eupl05g01462 516 SMART rav1_2 179 241 IPR001471 GO:0003700|GO:0006355
Eupl05g01462 516 SMART rav1_2 271 334 IPR001471 GO:0003700|GO:0006355
Eupl05g01462 516 ProSiteProfiles AP2/ERF domain profile. 271 328 IPR001471 GO:0003700|GO:0006355
Eupl05g01462 516 MobiDBLite consensus disorder prediction 33 57 - -
Eupl05g01462 516 MobiDBLite consensus disorder prediction 159 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01462 Eupl-Chr5 37912643 37917115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01462 88 356 AP2-EREBP Transcription Factor Family AT4G36920 65.714 1.59e-104 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Eupl05g01462 AP2 2.1e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01462 K09284 - nnu:104594736 684.1