Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01447 ATGCCTCCAAAGCAGCAGTCGAAAACCGACTTAGCGAAGAAGCAGAAGGTGGTCGAAGATAAGACCTTTGGACTCAAGAACAAAAACAAGAGCAAAAATGTCCAGAAATACGTCCAGAGTCTTCAGCAATCCGTTCAACCCAAGCCCGACGCTTCAAAGATATCCGCAAAGAAAAAGAAGGAAGAGGAGAAGGCGAGAGAGAAGGAGTTGAATGATTTGTTCAAGATTGCTGTTACTCAGCCCAAAGTTCCACTCGGTGTTGATCCCAAGTCGATATTATGCGAATTTTTCAAAGTGGGGCAATGTGCCAAGGGTTTTAAGTGCAAGTTCTCACACGATTTGAATGTCCAGAGGAAGGGCGAAAAGATTGATATTTACAGTGATAAGCGCGACGAAGAAACAATGGAGGACTGGGATCAAGAGATGCTGGAGAAGGTCGTGGAGTCGAAGAAAACAGAGTACAACCAGAATAAACCAACTGAGATTGTCTGTAAATACTTTTTGGAAGCAGTGGAGAAGAAACAATATGGTTGGTTCTGGGTTTGTCCAAATGGTGGTAAAGAGTGCCACTACAGACATGCTCTTCCTCCAGGATACGTGCTAAAATCTCAAATGAAGACTTTGTTGGAGGAAGAGACTGAAAGGATATCTATTGAGGAAGAGATTGAAAATCAGCGAGCAAAAATAGCAACTTCAACCCCGATGACTCCTGATTTGTTCATGCATTGGAAGAAGAAAAAAATGGAAGAAAGAGAAGCTGGCCTTGCTGCACAACAGATAGAGAGGGCTAAGAATGATCGGATGAGTGGTCGCGAGCTGTTCCTGTTAGATGCCAGCTTGTTCATGGATGATGCTGAGGCATATGAAAAGTACCAAAGAGAAGAGCCTGATGACACTGAACAGAAGGCCAAGAACAATTCTGCAGCAGGGGGGCCAAGTACTTCAACATCTTCAGTTGCTGATGCTGAGGAAGTGCTTCCTGATGATGATGACGATGATGAACTGGACATGGATGAATTAAATGAGCTGGAAGCTAGCCTATCAAGAACATCAATTCAAATCCGTGAACCAGGCGTTGAAGCATCCACTTAG 1092 0.4396 MPPKQQSKTDLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSLQQSVQPKPDASKISAKKKKEEEKAREKELNDLFKIAVTQPKVPLGVDPKSILCEFFKVGQCAKGFKCKFSHDLNVQRKGEKIDIYSDKRDEETMEDWDQEMLEKVVESKKTEYNQNKPTEIVCKYFLEAVEKKQYGWFWVCPNGGKECHYRHALPPGYVLKSQMKTLLEEETERISIEEEIENQRAKIATSTPMTPDLFMHWKKKKMEEREAGLAAQQIERAKNDRMSGRELFLLDASLFMDDAEAYEKYQREEPDDTEQKAKNNSAAGGPSTSTSSVADAEEVLPDDDDDDELDMDELNELEASLSRTSIQIREPGVEAST* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01447 363 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Eupl05g01447 363 Gene3D - 205 279 - -
Eupl05g01447 363 SUPERFAMILY CCCH zinc finger 88 113 IPR036855 GO:0046872
Eupl05g01447 363 MobiDBLite consensus disorder prediction 38 62 - -
Eupl05g01447 363 Coils Coil 246 266 - -
Eupl05g01447 363 MobiDBLite consensus disorder prediction 344 363 - -
Eupl05g01447 363 MobiDBLite consensus disorder prediction 323 341 - -
Eupl05g01447 363 MobiDBLite consensus disorder prediction 303 321 - -
Eupl05g01447 363 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 359 - -
Eupl05g01447 363 MobiDBLite consensus disorder prediction 291 363 - -
Eupl05g01447 363 Pfam DRG Family Regulatory Proteins, Tma46 216 300 IPR032378 -
Eupl05g01447 363 Coils Coil 208 228 - -
Eupl05g01447 363 Coils Coil 51 71 - -
Eupl05g01447 363 SMART c3hfinal6 158 195 IPR000571 GO:0046872
Eupl05g01447 363 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Eupl05g01447 363 Gene3D - 88 204 - -
Eupl05g01447 363 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01447 Eupl-Chr5 37743310 37751150 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Eupl05g01447 DFRP_C 7.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01447 - - vvi:100263325 589.341