Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01437 ATGGAAGTTCAAGATGCAGAGAGGATGGTTATAGCTAAACCCATTGCTTCAAAACCTTCTTCTTCCAGTTTCAGGTCCTTCTCCATGCTCCTTGTAGACGTCATTAACAGCTCGACACCTAGAGCATTTTCTGAAAAACCTGTAGCTGCCATTAGACCCAAAACAGTGAGGTTCAAACCAGCAGTAAATCGGGCTTCGGTTGCAGTCGTTTCATCCCAGGGTGAGATATCTGGAACAGAAGTTTGTTATTCATCTGACAAGGTTTTGAAACCAGAAAGAGAATCTACTGTGGTATATAAACCGTTGGCAAAACTCGTTTCAAGGACAACTGCTTCTCTCTTGGCAAATCTGGGAAACTTTGATATTTGTCGTCAACAAGTACCAGCACAGTTGAACGCCGAGGTTCAACAGCCAGACCAAGCAAAACACAATTTCCAAACTCATCTTACTTCAAACTTTAATCAGACACTGCCATCTGAAGTGAAAACAAACCAGACAATTGAGCCCTCAAAGACAGCATCACTGAACCTGGAAGAGAATCAGAGAGCTCTATTGCTCACATCTAGTGGGGACCGAACTTCTTATGATGGATATAATTGGAGAAAGTATGGGCAAAAGCAAGTGAAAGGAAGTGAGTACCCAAGAAGTTACTACAAGTGCACACACCCAAATTGCCCTGTGAAGAAGAAGGTTGAGAGATCACTTGATGGACAGATAGCAGAAATTGTTTACAAGGGCGAGCACAATCATTCAAAGCCTCAGCCTCCTAAACGCCACTCTTCAGGGGCACAAGAGCAAGGATTGATATCTGGTGGGACTGGTCAAGAAATTGGCAATCCATTATGGAGAAACCCCCTTGATGAGAGGAATGAAAGGTCTGAAGGTAAAATAGAGAATCAGAATGAAGTAGGATTGTCAGTAAATCCTTCTCTTCTGGGTCCTGTAATCGCTTACGATCCTGTAAGGATTGGAGCCTTTAATAGTGGTGGTGGAACTCCTGATAATTCTTGTGGTCTTAGTGGGGATTATGACAAAAGAAGCAAGGAAGTGGATGCAGAGTATGATGGACCTAAATGTAAGCGAAGGAAGAATGAGCATCAAGTCAATGAAGTAGGCATACTAGGTCAAGGTGTACAAGAACCTCGTATTGCGATGCAAAGTTCCACAGATTCTGAGATTTTAGGCGACGGCTTTCGCTGGCGAAAATATGGGCAAAAGGTCGTGAAGGGAAATCCATATCCTAGAAGTTACTACAGATGCACCAATCTCAAGTGCAATGTGCGAAAGCATGTGGAAAGGGCATTGGATGATCCACAATCTTTTATCACAACATATGAGGGAAAACATAATCATGAACTGCCCGTCAGAAGGAACGTGAATTGA 1383 0.4302 MEVQDAERMVIAKPIASKPSSSSFRSFSMLLVDVINSSTPRAFSEKPVAAIRPKTVRFKPAVNRASVAVVSSQGEISGTEVCYSSDKVLKPERESTVVYKPLAKLVSRTTASLLANLGNFDICRQQVPAQLNAEVQQPDQAKHNFQTHLTSNFNQTLPSEVKTNQTIEPSKTASLNLEENQRALLLTSSGDRTSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSLDGQIAEIVYKGEHNHSKPQPPKRHSSGAQEQGLISGGTGQEIGNPLWRNPLDERNERSEGKIENQNEVGLSVNPSLLGPVIAYDPVRIGAFNSGGGTPDNSCGLSGDYDKRSKEVDAEYDGPKCKRRKNEHQVNEVGILGQGVQEPRIAMQSSTDSEILGDGFRWRKYGQKVVKGNPYPRSYYRCTNLKCNVRKHVERALDDPQSFITTYEGKHNHELPVRRNVN* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01437 460 Gene3D WRKY domain 180 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g01437 460 Gene3D WRKY domain 379 455 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g01437 460 ProSiteProfiles WRKY domain profile. 189 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g01437 460 MobiDBLite consensus disorder prediction 247 301 - -
Eupl05g01437 460 ProSiteProfiles WRKY domain profile. 389 454 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g01437 460 SMART WRKY_cls 194 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g01437 460 SMART WRKY_cls 394 453 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g01437 460 FunFam WRKY transcription factor 185 254 - -
Eupl05g01437 460 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 146 458 IPR044810 GO:0003700
Eupl05g01437 460 SUPERFAMILY WRKY DNA-binding domain 389 454 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g01437 460 SUPERFAMILY WRKY DNA-binding domain 191 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl05g01437 460 FunFam WRKY transcription factor 57 380 454 - -
Eupl05g01437 460 MobiDBLite consensus disorder prediction 256 273 - -
Eupl05g01437 460 Pfam WRKY DNA -binding domain 396 452 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl05g01437 460 Pfam WRKY DNA -binding domain 196 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01437 Eupl-Chr5 37632420 37639781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01437 386 454 WRKY Transcription Factor Family AT2G37260 52.174 5.60e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl05g01437 WRKY 2.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01437 - - vvi:100256868 613.994