Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01436 ATGGGTTGGTTTCCCTGCTCTGGAAAATCAAACAAGAAAGCGGAGAAGAAGAAGACCGACGATCAGATCCAACCCACCTCCTCAGAGAAACTGAAGGCAAATCCTCTGTTGGATGTGAAGAAAGAGGGATCCAAGGATGGAGGATCTGATCACATTGCAGCTCAGACATTTACCTTTCGTGAATTGGCAGCTGCAACGAAGAACTTCAGGGCAGATTGTCTTTTGGGGGAGGGAGGTTTTGGTAGAGTTTATAAAGGGCGATTGGAAACTACCAATCAGATTGTGGCTATCAAGCAACTTGATCGTAACGGTTTGCAAGGGAACAGGGAATTCCTTGTTGAAGTATTGATGTTAAGTCTACTTCACCACCCCAACCTTGTTAATCTAATCGGGTATTGTGCTGATGGAGATCAGAGACTTTTGGTCTATGAGTACATGCCTTTAGGATCTTTAGAAGACCATCTACACGATCTTCCACCCGATAAGAAACGACTTGACTGGAACACGAGAATGAAAATAGCGGCTGGTGCAGCAAAGGGCTTGGAGTATTTGCATGACAAGGCAAATCCCCCTGTTATATACCGTGATTTGAAATGCTCTAACATTTTGCTTGGGGAAGGCTATCATCCTAAGCTTTCCGATTTTGGCTTGGCCAAACTGGGTCCTGTTGGGGATAAGACCCATGTCTCCACCAGGGTGATGGGCACATATGGCTATTGCGCACCGGAGTATGCAATGACTGGTCAGCTGACATTGAAATCAGACGTGTATAGCTTTGGGGTTGTTCTTTTGGAAATTATAACAGGCAGGAAAGCAATTGACAATTCAAAATCTGCCAGGGAGCACAATCTGGTTGCATGGGCACGGCCATTATTTAAGGACCAGAGGAAATTCTCACAGATGGCAGACCCAGTGCTCCAGTGCCAATATCCTGTGAGGGGCTTGTATCAGGCACTTGCTGTTGCCGCAATGTGCGTTCAGGAGCAGCCCACCATGCGACCCCTCATAGCAGACGTTGTTACGGCTTTGACCTACCTTGCTTCACAAACATACAACCCAGAAACCCAGCCAGTCCAAAGTTCCCGTATGGCCCCCTCCACTCCTCCTCGAACGAGAAGGGATAATGATAAGCGACTAAATGGTGGTAGTGGGTCTGAGAGAGACCAAACCAGAGGATTTAACTGA 1185 0.4709 MGWFPCSGKSNKKAEKKKTDDQIQPTSSEKLKANPLLDVKKEGSKDGGSDHIAAQTFTFRELAAATKNFRADCLLGEGGFGRVYKGRLETTNQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDLPPDKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAREHNLVAWARPLFKDQRKFSQMADPVLQCQYPVRGLYQALAVAAMCVQEQPTMRPLIADVVTALTYLASQTYNPETQPVQSSRMAPSTPPRTRRDNDKRLNGGSGSERDQTRGFN* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01436 394 CDD STKc_IRAK 75 344 - -
Eupl05g01436 394 MobiDBLite consensus disorder prediction 10 25 - -
Eupl05g01436 394 MobiDBLite consensus disorder prediction 369 384 - -
Eupl05g01436 394 SUPERFAMILY Protein kinase-like (PK-like) 55 367 IPR011009 -
Eupl05g01436 394 MobiDBLite consensus disorder prediction 34 48 - -
Eupl05g01436 394 MobiDBLite consensus disorder prediction 354 368 - -
Eupl05g01436 394 PANTHER OS07G0668900 PROTEIN 3 355 - -
Eupl05g01436 394 ProSiteProfiles Protein kinase domain profile. 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01436 394 MobiDBLite consensus disorder prediction 1 49 - -
Eupl05g01436 394 MobiDBLite consensus disorder prediction 354 394 - -
Eupl05g01436 394 FunFam Serine/threonine-protein kinase PBS1 146 361 - -
Eupl05g01436 394 FunFam Serine/threonine-protein kinase PBS1 41 145 - -
Eupl05g01436 394 Pfam Protein tyrosine and serine/threonine kinase 74 340 IPR001245 GO:0004672|GO:0006468
Eupl05g01436 394 Gene3D Phosphorylase Kinase; domain 1 39 145 - -
Eupl05g01436 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Eupl05g01436 394 SMART serkin_6 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01436 394 Gene3D Transferase(Phosphotransferase) domain 1 146 364 - -
Eupl05g01436 394 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01436 Eupl-Chr5 37619752 37625491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01436 49 348 Glycoside Hydrolase AT3G07070 72.667 3.37e-164 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Eupl05g01436 PK_Tyr_Ser-Thr 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01436 - - nnu:104599331 711.449