Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01416 ATGAATTATATAAAGGATCTAAAATTCCAGTTTTTTGGGTTTCAGAAGTTTCAGAACAGGCCCCAACACTCTGGAGTCAACTCAAAACTCGTTCAATTTGAAGCCGCCGCAATTGAGTGTGGCTCGGCTTCCGGCTTGTCTAATCGTAGTGAGTCAACGCCTTCAACGATGACGTCATTGTCCACGTCAGTATCTCTTTTTCGCGCGCATAAGAAGGCTGGAGGGTTCGGTCCCGGTTTTCATTCAACTCGCCAAACCAAAGTTACCAAACACCCCTTCAGCTCGCAGCCTCGCACCATGTACAACTACGGCGATTTATTTGCTCTTAGCTGCACTACTAACGATTTCCTCGGCTACGCCCCGGAAATCACCACTCCCCCGTCGATATACTCTGCAGCGCTACCTCTTCCTCCTCCTCTCGTTCCATCCAAACTCACCATCAACGAGTTCGACTCAGTTCACGAGGCTCTCGCAGCTCTGAAATCGGAAGTTGGTTATAGCAGCAGCAGTAGCTACGGGTCTCCGACTTCTCTACCGAATTGTTACGTTCAGCGCCCGAGTTTTATTCAAAGGAGCGTGAGCAGTCACTCGCTTCAAAAAAACGGGTTCCATCATCCCATTTTCTCGTCTCTCGAAGAATCTCGTCGCGAGATTTTGGACTTGGAGACCGGTCCGATGAGAAAGGTGTTTAGCACCGGCGACTTACAGAGAATTAATACGGTGCAACATAGTCGACGATCAGAAAGCCCATTATCGCATGAGAATTGTGGCATTGAAGGGATGAACAAGGTCGGGCGTTATACGGCGGAAGAGCGAAAAGAGAGAATTGAGAGATACAGGAGCAAGAGAAACCAGAGGAATTTCAATAAGAAAATCAAGTATGCATGTAGGAAGACATTAGCAGACAGTCGTCCTCGAATTAGAGGCCGGTTCGCAAGGAACGAAGAAATGGGAGAGAGTTCTCAAACACAATGGAGCCAAATGGGTGGAGAAGAAGATGAAGAGGAAAGTGATGTTTGGAATATCAATTTCTTTGATCCCTTCTCTGTAGAATCAAAGGTTAGATTTGGGTCTGGCCCAATTCAAGAGCTGCCAAATCAACTGGATGGCCTGAAGCCTGGAAAAGAATGTGCAGCACATTGTACCCACCCCAACGTTGACTTCCATTTTATTCTTTCCTTTGCCATTGACTACACCACCTCTTCATCTCCCTCCCCCACCAATGGTCACTTCAACGTGTTCTGGGACTCTGACAACCTCAGTCCTTCCCAAGTCTATTCCATCAAGATGGACAACCCAAACGTCAAGGTAGCTTTGAGTCTGGGAGGCGATAGTGTCGGCAACGGCTATGCTTACTTCGATCCTTCTTCAACAGATTCTTGGGTTGGAAATGCTGTTTCTTCACTCACAAAGATCATAAAAGAGTATCATTTGGATGGTATCGATATTGACTGCGAGCACTTCAAGACTGACCCTGATACTTTCGCCGAGTGCTTCAGACAGCCTTTGACAACCCTGAAAGAAAATGGGGTCATTTCATTTGCTTCTATAGCTCCCTACGATGACAGCCCAGTTCAGAGCCATTACTTGGCCCTGTGGAGGAGGTATGGGAAACTCAATTTCCAATTTTATGCATATGATAGCAGAACAAGTGTATCTCAGTTTATAAAATACTTCGAGAACCAGAGCTCTAATTATGAAGGGGGTAAAGTTTTAGCCAGCTTCATCAGCGATGGGAGCGGTGGCTTATCTCCAGATGGTGGTTTCTATACCGCTTGTAGTAAGCTCAGGAGTCAGGGAAAACTCCATGGTATCTTCGTCTGGTCTGCAGATGACTCCAAGGCGAGTGGTTTCCGTTACGAGAAGCAATCGCAAGCACTGTTGGCAAGCCCACACTAA 1899 0.4681 MNYIKDLKFQFFGFQKFQNRPQHSGVNSKLVQFEAAAIECGSASGLSNRSESTPSTMTSLSTSVSLFRAHKKAGGFGPGFHSTRQTKVTKHPFSSQPRTMYNYGDLFALSCTTNDFLGYAPEITTPPSIYSAALPLPPPLVPSKLTINEFDSVHEALAALKSEVGYSSSSSYGSPTSLPNCYVQRPSFIQRSVSSHSLQKNGFHHPIFSSLEESRREILDLETGPMRKVFSTGDLQRINTVQHSRRSESPLSHENCGIEGMNKVGRYTAEERKERIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNEEMGESSQTQWSQMGGEEDEEESDVWNINFFDPFSVESKVRFGSGPIQELPNQLDGLKPGKECAAHCTHPNVDFHFILSFAIDYTTSSSPSPTNGHFNVFWDSDNLSPSQVYSIKMDNPNVKVALSLGGDSVGNGYAYFDPSSTDSWVGNAVSSLTKIIKEYHLDGIDIDCEHFKTDPDTFAECFRQPLTTLKENGVISFASIAPYDDSPVQSHYLALWRRYGKLNFQFYAYDSRTSVSQFIKYFENQSSNYEGGKVLASFISDGSGGLSPDGGFYTACSKLRSQGKLHGIFVWSADDSKASGFRYEKQSQALLASPH* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01416 632 Pfam CCT motif 272 314 IPR010402 GO:0005515
Eupl05g01416 632 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 478 486 IPR001579 GO:0004553|GO:0005975
Eupl05g01416 632 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 339 632 IPR001223 GO:0005975
Eupl05g01416 632 PANTHER CHITINASE 2-LIKE 383 630 - -
Eupl05g01416 632 CDD GH18_narbonin 384 613 - -
Eupl05g01416 632 Gene3D Glycosidases 374 631 - -
Eupl05g01416 632 ProSiteProfiles CCT domain profile. 272 314 IPR010402 GO:0005515
Eupl05g01416 632 PRINTS 2-S globulin family signature 591 610 IPR000677 -
Eupl05g01416 632 PRINTS 2-S globulin family signature 380 399 IPR000677 -
Eupl05g01416 632 PRINTS 2-S globulin family signature 425 443 IPR000677 -
Eupl05g01416 632 Pfam Glycosyl hydrolases family 18 390 548 IPR001223 GO:0005975
Eupl05g01416 632 SUPERFAMILY (Trans)glycosidases 380 623 IPR017853 -
Eupl05g01416 632 MobiDBLite consensus disorder prediction 312 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01416 Eupl-Chr5 37347555 37354493 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01416 260 323 C2C2-CO-like Transcription Factor Family AT5G24930 45.312 3.07e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl05g01416 Glyco_hydro_18 7e-13 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01416 - - vvi:100253579 406.371