Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01406 ATGTCTCATATCAGATCGGATGACAGTTCACAGACGAGACTAGGGTTTTTCGGCCGGAAACAAGCGATGGAAGTCGAAAGTATCCCCACCACAGGGTTGTTTCCGACGCTTGGCCAGCTCTTGAAGCGAGTTGGAGACGCGCGAAATGGGACCGGAGACGAGACTCCGGTGCACCAGGTGCTCGAACTGAACGACACGAGTATCGAACCGAGATCTTTCCCTTTCATTCTCTCCTTCACTAATCTGACGTACAGCGTTAAGACCCGCCGGAAAATGAGTTTTCCGTCATTTTTTAGCCGGAAGAATGACCTCGAAGCGGCGGCAAATCCGGTGGAGACGGAAAGCAAGTTCTCGAACACGAAGATACTTTTGAATGAGATCTCTGGCGAAGCGAAGGAGGGAGAGATTTTGGCCGTCCTTGGTGCGAGTGGGTCGGGGAAATCAACTTTGATAGACGCTCTCGCGAATCGGATTGCGAAGGGGAGCTTGAAAGGATCGGTAGCCCTAAATGGCGAAGCTTTAGAATCTCGACTTCTGAAGGTAATCTCAGCGTATGTGATGCAAGACGATCTACTCTTTCCGATGTTAACAGTCGAAGAGACGCTCATGTTCTCGGCCGAGTTCAGGCTGCCTCGCTCGCTCTCGAAATCGAAGAAGAAAGCTAGAGTTCAAGCTCTAATAGATCAGCTAGGGCTAAGGAGCGCCGCCAAGACAGTTATCGGAGATGAAGGCCACAGAGGCGTCTCCGGTGGCGAGCGTCGACGTGTATCTATCGGAATCGACATAATTCATGATCCAATCATCTTGTTTCTCGACGAACCGACGTCTGGGCTGGACTCGACAAGCGCTTTCATGGTGGTTAAGGTCTTGCAACGGATTGCTCAGAGCGGCAGCATTGTTATCATGTCCATACACCAACCTAGTTACAGAATTCTTAGCCTGCTCGATCGTGTGCTATTTCTCTCACGTGGACAGACTGTTTACGGTGGCTCACCGGCGAGTCTCCCTCTTTTCTTCGCTGAGTTTGGGCATCCGATTCCAGAAAATGAGAATCGGACTGAGTTCGCACTCGATTTAATACGCGAACTTGAAGGATCCCCTGGTGGAACGAAGAGCTTGGTGGAATTCAACAAGTCATGGCAAACCATGAAGCATCCCCGGAATTCGGATTCCAATCGATTGGGGCTATCACTAAAAGACGCGATAAGTGCTAGTATTTCAAGGGGGAAACTAGTCTCTGGGGCGACGAACAACAATGCAAGCCCTACATCAACGATGGAAACTTACGCTAATCCCTTCTGGATTGAGATCGCTGTGCTATCTAGGCGATCGATAACGAATACTAAGCGACTACCGGAGCTGTTTGGGATCCGATTGGGGGCGGTTTTGGTCACAGGTTTCATCTTAGCCACCATGTTCTGGCAGCTCGATAATTCGCCTAGGGGCGTACAAGAACGATTAGGGTTCTTCGCGTTCGCCATGTCTACAACCTTTTACACATGTGCCGATGCCCTCCCAGTCTTTCTCCAAGAGCGATATATTTTTATGCGAGAGACCGCATATAACGCTTATCGTCGATCGTCATACGTACTAGCACACTCGATAATAGCCATTCCTCCCATAATCTTTCTCGCTGTCGCATTTGCTGCAACAACATTCTGGGCGGTCGGTCTTGCTGGTGGTCTTTCTGGATTCATCTTCTTTTTCTTTATAATTTTCGCTTCGTTTTGGGCTGGGAGCTCTTTCGTGACATTCCTCTCTGGAGTAGTATCTCATGTGATGTTGGGTTACACAGTTGTCGTCGCCATTCTTGCTTACTTCCTTCTCTTTAGTGGGTTCTTCATCAATAGGGATCGAATTCCACCTTACTGGCTTTGGTTCCATTACATCTCATTGGTGAAGTACCCATACGAGGGAGTATTACAGAACGAATTCGATGACCCAATCAAATGTTTCGTTCGAGGGGCTCAGATCTTTGACAATACTCCACTTGCAGTCGTCCCCACAGCGATGAAGATTAACCTGTTGAAGACGTTGAGCAGTTCGTTGGGGATGAATATTACGAGCACCACCTGCGTTACAACAGGATCGCAAATATTGAAACAACAAGGGATCACTGATCTGAGCAAATGGAGTTGCTTGTGGATTACTGTGGCTTGGGGTTTCTTCTTTAGGATTGTATTCTACTTCTCTTTGTTGTTGGGAAGCAAGAACAAGAGAAGGTAG 2226 0.4838 MSHIRSDDSSQTRLGFFGRKQAMEVESIPTTGLFPTLGQLLKRVGDARNGTGDETPVHQVLELNDTSIEPRSFPFILSFTNLTYSVKTRRKMSFPSFFSRKNDLEAAANPVETESKFSNTKILLNEISGEAKEGEILAVLGASGSGKSTLIDALANRIAKGSLKGSVALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSKKKARVQALIDQLGLRSAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILSLLDRVLFLSRGQTVYGGSPASLPLFFAEFGHPIPENENRTEFALDLIRELEGSPGGTKSLVEFNKSWQTMKHPRNSDSNRLGLSLKDAISASISRGKLVSGATNNNASPTSTMETYANPFWIEIAVLSRRSITNTKRLPELFGIRLGAVLVTGFILATMFWQLDNSPRGVQERLGFFAFAMSTTFYTCADALPVFLQERYIFMRETAYNAYRRSSYVLAHSIIAIPPIIFLAVAFAATTFWAVGLAGGLSGFIFFFFIIFASFWAGSSFVTFLSGVVSHVMLGYTVVVAILAYFLLFSGFFINRDRIPPYWLWFHYISLVKYPYEGVLQNEFDDPIKCFVRGAQIFDNTPLAVVPTAMKINLLKTLSSSLGMNITSTTCVTTGSQILKQQGITDLSKWSCLWITVAWGFFFRIVFYFSLLLGSKNKRR* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01406 741 FunFam ABC transporter G family member 6 113 339 - -
Eupl05g01406 741 Gene3D - 111 337 IPR027417 -
Eupl05g01406 741 Pfam ABC-2 type transporter 305 364 IPR043926 GO:0140359
Eupl05g01406 741 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 59 727 - -
Eupl05g01406 741 SMART AAA_5 133 325 IPR003593 GO:0016887
Eupl05g01406 741 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 335 IPR027417 -
Eupl05g01406 741 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 99 348 IPR003439 GO:0005524
Eupl05g01406 741 ProSitePatterns ABC transporters family signature. 248 262 IPR017871 GO:0005524|GO:0016887
Eupl05g01406 741 Pfam ABC-2 type transporter 437 645 IPR013525 GO:0016020|GO:0140359
Eupl05g01406 741 Pfam ABC transporter 124 276 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01406 Eupl-Chr5 37193849 37196686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01406 123 308 Calmodulin-binding Proteins AT2G36910 30.688 2.41e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01406 K05681 - mof:131167059 1155.97