Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01404 ATGGGTAAAGGAGGGCAAGATTATGGGAAACAAGGTAGTACTGGATCAAAACCGTCCGACCAGGACACCTTCCCGGCGTGGGCTAAAGATGTTCAAGATTGTATGGCGAAGTACAAGGTGACCAGAGAATTCGGTTTGACATCTGAAGAAGTCGAGAAAGAGCGCCAGATCTACGGTTGGAATGAGTTGGAGAAGCACGAGGGCCCATCTATCTGGAGTCTGATTCTCGAACAGTTCAGTGACACTCTAGTGCGGATTCTACTCGTTGCCGCTGTTATTTCCTTTGTCCTCGCTTGGTACGATGGGGACGAAGGGGGCGAGATGGGAATCACAGCGTTCGTGGAGCCTCTCGTGATTTTCCTGATCTTGATTGTGAACGCCATTGTTGGAGTCTGGCAGGAGAACAACGCGGAGAAAGCCCTAGAAGCTTTGAAGGAAATCCAATCCGAGCATGCCACGGTGATACGGGAAGGGAAACGTATTACCAATCTTCCTGCGAGGGAGCTCGTCCCAGGTGATATTGTTGAGCTCAGGGTGGGTGACAAAATCCCCGCTGATATGCGGGTTTTGAGTCTCATAAGCTCTACTGTCAGGGTTGAACAGTGTTCGTTGACGGGAGAGAGTGAAGCAGTTAACAAGACCAACAAGGTCGTTCCAGGAGACATGGACATTCAAGGGAAGAAATGTATGGTTTTCGCAGGGACAACAGTTGTGAATGGAAACTGCCTCTGCTTGGTCACCCAGACGGGTATGAACACGGAGATCGGGAAGGTGCAATCTCAGATTCATGAAGCTTCACAGAACGAAGAAGATTCCCCATTGAAGAAGAAGCTGAATGAATTCGGAGAGGTCCTCACAGCCATAATCGGAGTGATCTGTGCACTGGTGTGGCTCATCAACGTAAAGTACTTCTTTACCTGGGATTACGTGGATGGGTGGCCGACGAATTTTAAGTTCTCTTTTGAGAAGTGCACATACTACTTTGAGATTGCAGTAGCGTTAGCGGTGGCCGCCATTCCAGAGGGTTTACCAGCAGTAATCACAACCTGCTTGGCACTTGGTACACGTAAGATGGCTCAGAAGAATGCGCTCGTGCGGAAGTTGCCAAGCGTTGAGACTCTGGGTTGTACAACAGTGATTTGTTCTGATAAAACAGGTACACTGACTACCAATCAGATGGCAGTGGCGAAGCTTGTGGCGATGGGACCTGGGCCAGATACAATCCGGACATTCAAAGTGGATGGAACCACGTATAGTCCTTTTGATGGAAGGATACATGATTGGCCCACTGGTAGAATGGATGCAAATCTTCAAATGATCGCGAAGATCGCTGCTGTTTGCAATGATGCGGGTGTTGCACACTCAGGGCATCAGTTTGTTGTTAATGGAATGCCCACTGAGGCAGCACTGAAGGTTTTAGTTGAGAAAATGGGGCTTCCTATAGGCTTTGATAGTTCATTTTCGGGCTCTGCTGATGTCCTACGTTGTTGTCAACAATGGAATGCCATTGAACATCGGATTGCAACTCTGGAGTTTGACCGAGATCGGAAGTCCATGGGAGTTATTGTGAAGACAGAGTCAGGAAGAAATGCATTACTGGTGAAGGGTGCGGTAGAGAATTTACTGGAGAGAAGTGCATATGTTCAGTTGCTTGATGGTTCTGTAGTAAAATTGGATCAAAGTTCGAGAAACGTTATTTTACAAGCTCTTCGTGAAATGTCCACGATTGCATTACGCTGTTTGGGTTTTGCATACAAGGACGAACTCTCTGAATTTGCAACATATAATGGTGATGAAGATCATCCAGCTCATGACCTTTTACTTAATCCAGCCAATTACCCAAACATTGAGAGTGATCTCATTTTTGCTGGCATGGTTGGACTGAGGGATCCTCCTCGAGAAGAGGTTCACAAAGCAATTGAGGACTGCAGAGCAGCTGGCATCCGTGTTATGGTTATTACAGGCGATAACAAGAATACAGCTGAAGCAATTTGCCGTGAAATAGGTGTATTTGGACCCAAAGAAGACATTCGTTCAAAAAGCTTAACAGGAAGAGATTTTATGGATCTTCTCGATCAGAAAAACCATTTAAGGCAAAGTGGTGGGCTTCTCTTCTCTAGGGCTGAACCAAGGCATAAACAAGAGATAGTGAGGTTGCTCAAGGAAGATGGCGAGGTGGTTGCAATGACTGGTGATGGGGTGAATGATGCCCCTGCTTTGAAATTGGCCGATATTGGAATTGCGATGGGCATTGCTGGAACTGAGGTTGCCAAGGAAGCCTCTGACATGGTGTTAGCGGATGATAATTTCAGTACGATAGTTGCTGCAGTTGGCGAGGGCAGATCTATTTATAACAATATGAAGGCTTTTATCAGGTACATGATCTCCTCAAATATTGGTGAGGTCGCATCTATATTTCTAACGGCAGCTTTAGGTATTCCAGAAGGCCTAATCCCCGTTCAGCTTTTGTGGGTCAATCTTGTTACGGATGGCCCCCCTGCAACAGCTTTGGGATTCAATCCACCAGATAAAGATATAATGAAGAAACCCCCTCGAAGAAGTGATGACTCATTGATCAGCGCTTGGATTTTATTCCGTTATCTGGTTATTGGGCTCTATGTTGGGCTAGCAACTGTGGGTGTCTTCATCATATGGTTTACACAGGGTTCCTTTTTGGGAATCGATCTGAGCGGTGATGGCCACACCCTTGTCACCTATTCCCAGCTCTCCAGCTGGGGTCAGTGCCCTTCCTGGGAGGGCTTCACAGTTTCTCCATTCACAGCTGGAGCTCAGGTGTTCTCATTTGACGCCAACCCCTGTGACTATTTCCAGGCCGGCAAAGTGAAAGCCATGACCCTCTCCCTCTCTGTCTTGGTTGCCATCGAGATGTTCAATTCCCTCAATGCCTTGTCTGAGGATGGCAGCCTCTTGACAATGCCTCCGTGGGTCAATCCTTGGCTCCTTGTGGCCATGTCCGTCTCCTTCGGCCTGCATTTCTTGATCCTCTATGTGCCATTCCTTGCCCAAGTGTTTGGCATCGTGCCTCTCAGTCTGAATGAATGGCTCTTGGTGTTGGCTGTTGCATTCCCAGTGATCCTGATTGATGAGATTCTCAAGTTTGTCGGGCGGTGTACAAGTGGTTTACGCCCGAAGAAATCATTGAAGCCCAAAACAGAGTAA 3180 0.4739 MGKGGQDYGKQGSTGSKPSDQDTFPAWAKDVQDCMAKYKVTREFGLTSEEVEKERQIYGWNELEKHEGPSIWSLILEQFSDTLVRILLVAAVISFVLAWYDGDEGGEMGITAFVEPLVIFLILIVNAIVGVWQENNAEKALEALKEIQSEHATVIREGKRITNLPARELVPGDIVELRVGDKIPADMRVLSLISSTVRVEQCSLTGESEAVNKTNKVVPGDMDIQGKKCMVFAGTTVVNGNCLCLVTQTGMNTEIGKVQSQIHEASQNEEDSPLKKKLNEFGEVLTAIIGVICALVWLINVKYFFTWDYVDGWPTNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKLVAMGPGPDTIRTFKVDGTTYSPFDGRIHDWPTGRMDANLQMIAKIAAVCNDAGVAHSGHQFVVNGMPTEAALKVLVEKMGLPIGFDSSFSGSADVLRCCQQWNAIEHRIATLEFDRDRKSMGVIVKTESGRNALLVKGAVENLLERSAYVQLLDGSVVKLDQSSRNVILQALREMSTIALRCLGFAYKDELSEFATYNGDEDHPAHDLLLNPANYPNIESDLIFAGMVGLRDPPREEVHKAIEDCRAAGIRVMVITGDNKNTAEAICREIGVFGPKEDIRSKSLTGRDFMDLLDQKNHLRQSGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYNNMKAFIRYMISSNIGEVASIFLTAALGIPEGLIPVQLLWVNLVTDGPPATALGFNPPDKDIMKKPPRRSDDSLISAWILFRYLVIGLYVGLATVGVFIIWFTQGSFLGIDLSGDGHTLVTYSQLSSWGQCPSWEGFTVSPFTAGAQVFSFDANPCDYFQAGKVKAMTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLVAMSVSFGLHFLILYVPFLAQVFGIVPLSLNEWLLVLAVAFPVILIDEILKFVGRCTSGLRPKKSLKPKTE* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01404 1059 SFLD C1.7: P-type atpase like 362 782 - -
Eupl05g01404 1059 Pfam Cation transporting ATPase, C-terminus 815 1041 IPR006068 -
Eupl05g01404 1059 NCBIfam HAD-IC family P-type ATPase 118 231 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl05g01404 1059 NCBIfam HAD-IC family P-type ATPase 320 400 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl05g01404 1059 NCBIfam HAD-IC family P-type ATPase 704 811 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl05g01404 1059 Gene3D - 378 775 IPR023214 -
Eupl05g01404 1059 MobiDBLite consensus disorder prediction 1 24 - -
Eupl05g01404 1059 Pfam haloacid dehalogenase-like hydrolase 378 744 - -
Eupl05g01404 1059 SUPERFAMILY HAD-like 379 834 IPR036412 -
Eupl05g01404 1059 ProSitePatterns E1-E2 ATPases phosphorylation site. 383 389 IPR018303 -
Eupl05g01404 1059 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 237 396 - -
Eupl05g01404 1059 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Eupl05g01404 1059 Coils Coil 137 157 - -
Eupl05g01404 1059 SUPERFAMILY Calcium ATPase, transmembrane domain M 25 1044 IPR023298 -
Eupl05g01404 1059 PRINTS P-type cation-transporting ATPase superfamily signature 381 395 - -
Eupl05g01404 1059 PRINTS P-type cation-transporting ATPase superfamily signature 730 749 - -
Eupl05g01404 1059 PRINTS P-type cation-transporting ATPase superfamily signature 646 656 - -
Eupl05g01404 1059 PRINTS P-type cation-transporting ATPase superfamily signature 754 766 - -
Eupl05g01404 1059 PRINTS P-type cation-transporting ATPase superfamily signature 624 635 - -
Eupl05g01404 1059 PRINTS P-type cation-transporting ATPase superfamily signature 200 214 - -
Eupl05g01404 1059 FunFam Calcium-transporting ATPase, putative 128 263 - -
Eupl05g01404 1059 Gene3D - 77 1043 - -
Eupl05g01404 1059 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 391 631 - -
Eupl05g01404 1059 SUPERFAMILY Calcium ATPase, transduction domain A 149 260 IPR008250 -
Eupl05g01404 1059 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 794 1048 - -
Eupl05g01404 1059 Gene3D - 45 265 - -
Eupl05g01404 1059 FunFam Calcium-transporting P-type ATPase, putative 622 775 - -
Eupl05g01404 1059 PANTHER CALCIUM-TRANSPORTING ATPASE 29 1045 - -
Eupl05g01404 1059 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
Eupl05g01404 1059 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 388 628 IPR023299 GO:0000166
Eupl05g01404 1059 Pfam E1-E2 ATPase 147 361 - -
Eupl05g01404 1059 Gene3D - 391 631 IPR023299 GO:0000166
Eupl05g01404 1059 SFLD p-type atpase 362 782 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01404 Eupl-Chr5 37162212 37174118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01404 1 1059 Primary Pumps ATPases(2) AT1G07810 80.791 0.0 1754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01404 K01537 - ming:122084181 1845.48