Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01365 ATGGAGACGCAGTGGATTACTGAATTCCCTCACACGAACATGGATAAACGCCCTAGAAAAAGACCTAGATTAACATGGGACATTCCCCCTCCTGTTCCACCTCCCAAGGCCATTCCTACAATATATTGTGGGCAAGAATTTGCGAGTGGAGTGGTCTCCAACCATGCGTTTGCTTCTCTGTATTACAAGATGCAAGCTCGCAATGGATCCCCTCCCTGGCGAAATGATGATAAAGATGGCCATTACATCTTTGTAATCGGAGAGAATTTAACTCCTCGTTACAGGATTCTCAGCAAAATGGGTGAAGGGACATTTGGACAAGTCTTGGAATGTTGGGACAATGAAAAGAAAGAAATGGTGGCAATTAAAGTTGTGCGTTCAACTCACAAGTATCGTGAAGCTGCCATGATTGAGGTTGATGTACTTCAGAAGCTTGCCAAACATGACGTTGGTGGCACTCGTTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATTTGTATTGTATTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTGCGCAAAAACAGCTACCGTTCATTTCCCATTGATCTTGTTCGGGAGCTTGGCAGACAACTTTTGGAGTCTGTAGCATTTATGCATGAACTAAGGCTTATTCACACTGATTTAAAGCCAGAAAATATTCTTCTTGTTTCCTCGGAGTATGTCAAGGTGCCTGATTATAAGCATCTGCCACGTTCCACCAAAGATGGTTCTTATTTTAAGAATCTGCCAAAGTCTAGTGCTATTAAGCTGATTGATTTTGGGAGCACAACGTTTGAACATCAAGATCACAACTATGTGGTGTCAACACGCCATTACCGTGCACCAGAGGTTATTTTGGGGCTTGGATGGAACTATGCTTGTGATTTGTGGAGTGTTGGTTGCATACTTGTTGAGCTTTGCTCGGGCGAAGCCCTCTTCCAAACCCATGAAAACTTGGAACATCTTGCCATGATGGAGAGGGTGTTAGGCCCACTTCCTCAACATATGGTTATGAGAGCTGACCGGCGTGCTGAGAAATATTTCAGGAGGGGTGCACGATTGGATTGGCCTGAAGGTGCAACTTCAAGAGAAAGCATGAGGGCAGTTTGGAAATTGCCTCGCCTCCAAAACCTTGTGATGCAGCATGTTGATCACTCCGCAGGGGATCTAATTGATCTCTTGCAAGGCCTCCTGCGTTATGATCCAGCTGAGCGGATTAAAGCAAGGGAAGCACTTAGGCATCCCTTCTTCACAAGAGATCTGAGAAGGTGTGGCTATTCCTTGTAG 1302 0.4462 METQWITEFPHTNMDKRPRKRPRLTWDIPPPVPPPKAIPTIYCGQEFASGVVSNHAFASLYYKMQARNGSPPWRNDDKDGHYIFVIGENLTPRYRILSKMGEGTFGQVLECWDNEKKEMVAIKVVRSTHKYREAAMIEVDVLQKLAKHDVGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSSEYVKVPDYKHLPRSTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHNYVVSTRHYRAPEVILGLGWNYACDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQHMVMRADRRAEKYFRRGARLDWPEGATSRESMRAVWKLPRLQNLVMQHVDHSAGDLIDLLQGLLRYDPAERIKAREALRHPFFTRDLRRCGYSL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01365 433 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 3 424 - -
Eupl05g01365 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Eupl05g01365 433 Gene3D Phosphorylase Kinase; domain 1 81 174 - -
Eupl05g01365 433 MobiDBLite consensus disorder prediction 9 30 - -
Eupl05g01365 433 FunFam Serine/threonine-protein kinase AFC2 170 422 - -
Eupl05g01365 433 ProSiteProfiles Protein kinase domain profile. 94 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01365 433 SUPERFAMILY Protein kinase-like (PK-like) 81 426 IPR011009 -
Eupl05g01365 433 CDD PKc_CLK 81 422 - -
Eupl05g01365 433 Gene3D Transferase(Phosphotransferase) domain 1 148 422 - -
Eupl05g01365 433 SMART serkin_6 94 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01365 433 Pfam Protein kinase domain 94 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01365 433 FunFam Serine/threonine-protein kinase AFC2 81 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01365 Eupl-Chr5 36668906 36675315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01365 85 422 Core Cell Cycle Gene Families AT1G76540 27.066 2.00e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Eupl05g01365 Pkinase 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01365 K08287 - ming:122086681 805.053