LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl05g01363	ATGGTAGGGAAGGAGGATGCCGCCGGTTCTCGGGGGCAGTGTCAGGTTTCGGGAGGCCGGAAAATGTTTTGGAGGTCGGCATCATGGTCGTCTTCCCGGTCTGCGCAAATACCTGCACATTTTGATCATGTAAAAGATTGTGCAGATCCGCATAGCGCTGATAAGAATAATGGTGGGCAATTCAGGCGGTTTCCTGTTCCTCTCACCCCGCGATCTCAACAGAACTGTAAGGCTCGTGCTTGTTTGCCCCCGTTGCAGCCATTATCAATTGCTCGTCGTAGCTTGGATGAGTGGCCGAGAGCGGGTTCAGATGATGTTGGAGAATGGCCCCAACCTCCCACTCCTAGTGGTAGAGGGGATTCTAGCAAGCCGGGGGAAGGGTTAAAACTCGACGTATCATCGTTCCAGAAAAACTCTGATCCCACAGGGACTCTTGTTAATAGAGACAGGATTGCTTTCTTTGATAAGGAATGCTCAAAGGTTGCAGACCACATTTATCTTGGAGGAGATGTAGTTGCCAGGGACAGGGATATTCTCAGACAGCACGGTATCACCCATGTTCTCAATTGTGTGGGTTTCGTTTGCCCTGAATACTTCAAGGCCGACCTTGTGTACAAGACGTTGTGGTTGCAGGATAGCCCTTCGGAGGACATCACCAGCATACTCTATGATGTATTCGACTACTTTGAAGATGTCAGAGCGCAAGGGGGGAGGGTTCTGGTCCACTGTTGTCAGGGCGTGTCTCGCTCCACATCTTTAGTTATTGCATATCTCATGTGGAGGGAAGGACAGAGCTTTGATGATGCCTTTCAGTATGTGAAGGCAGCTAGGGGGATTGCGAACCCAAATATGGGATTTGCTTGCCAGTTGTTACAGTGCCAAAAAAGGGTCCATGCCATTCCGCTTAGCCCCAGTTCCGTACTGAGAATGTACAGGATGGCCCCACACTCTCCATATGATTCTTTGCACCTGGTTCCGAAATTGTTGAATGATCCTTCTCCATCGGCCCTGGATTCTAGAGGAGCATTTATCATACATGTGCCTTCAGCGATCTACGTGTGGATTGGTAAAAACTGCGAACCCATCATGGAAAGGGAAGCAAAGTGGGCCGCTTTACAGGTTGTTCGATATGAGAGAGTGCAGGGCCAAAGAATAAAGATCGAGGAAGGGGAAGAGCCATCAGAATTTTGGGATGCTTTTTGCAATCTCCCACCTTCAGTGGATAAATCTGGCAGCGGAGTGCAGGTAGAATCAGCGGTTAAGATTGGCCCAGGTGATAGAAAGGTAGATTTGTATGATCCAGATTTTGAGCTTTTCCAAAAAGCAATCACTGGAGGTGTTGTGCCTCCATTTTCATCGTCGGGGGCGGGGCATGAAACCCACCTTCCTGCGAGAGAAAGCAATTGGAGTGTCTTAAGGCGCAAGTTTGCCTCTGGCAATGTGAAAGAGTTTGTCTCAGCTCCCAAGGTTGCCCTCTGTAGAGTCTACTCCGATTCGATGTTGATAGTGGACTCAAATAGTCATGTAAACAAAATTCGACCCTTTTCTGCAAGCTCATCTTCATTGTCTTCACCTACTTATCTTTCTCCAAGTTCTCTCTCTTCTAATTCAAGTACAAGTTCTAAATTTAGTTCAGAATCACTGTCTCCTTCGACATCTTCACGTTCTCTTACACCATCACCTGCATCATCTACCTTGTCTGACTCGTCACTCCTTTCGTCCAAGAAGTCTCTTCATCCCATACCTAACAGTCCTGAAGCCATAGGCGTTATTCCTACTTCAAAACCTTGTTCCCAAGCAGTGCCGTCACCATCTAAAAGATTTGCACTTTCCCTTGCTGAACGCAGAGGTAGCTTGTCACCGTCTCTAAAGTTGTCAGCCTTGAATGATGGTGTATCTCTTTCATCTAGAAGGGAGAAAAATGCATCCTCCACTTGTTTTGCAATTCAACAAGATGGCTTTAGGAGAATCAACAATTCCTGCTCTTTGGACGAGCGATGTGATAAAGAAGAATTTTTGGAGTCCAGAGGGGAGACTGCAAATGAAGAGGGGGATGTAACTCAAGAAGGTCAGTTGCTTATATGTTCAAGTGGATCAACTATTGATGGTACATGTTGCAAGGAAGGTGCTTTGGTCAAAACTCTTGGAGAACATCTGAGAAATTATCCTTTGCAAGTAGAACGGGAGTTCTCTGTCTTGACTGGCTTGGTGGCCAATGGTTCAGAAATCTGTAACCCGATGCAACCCTTAGTATTCCGCTGGCCTGATTTAGAAAAGTTTGCAGCATTTGGTGCTGGTGATCTGGATTCCAAATCTGCATTTCTTTTCTTGGCTCCAAGTACAGGTGTAAGCAAGCATAAGGACAGGATGCTGTATTTGTGGGTAGGAAAATCGTTCAAACACGATAATAGCTGGATTCAACTAAATAAGAACAAGGATCTATGTGAAGTAGAAGAGATTGACTGGAATCAAGTTGGTTGTGCCTTTCTTACTCTAATGGGTCTGCCAAATGATATCCCCATTAAGGTTGTTAAAGAGCAAGAGGAGCTAGGTGATTTCCTTGTACTGTTGAATTCTTTGTAG	2583	0.4611	MVGKEDAAGSRGQCQVSGGRKMFWRSASWSSSRSAQIPAHFDHVKDCADPHSADKNNGGQFRRFPVPLTPRSQQNCKARACLPPLQPLSIARRSLDEWPRAGSDDVGEWPQPPTPSGRGDSSKPGEGLKLDVSSFQKNSDPTGTLVNRDRIAFFDKECSKVADHIYLGGDVVARDRDILRQHGITHVLNCVGFVCPEYFKADLVYKTLWLQDSPSEDITSILYDVFDYFEDVRAQGGRVLVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIANPNMGFACQLLQCQKRVHAIPLSPSSVLRMYRMAPHSPYDSLHLVPKLLNDPSPSALDSRGAFIIHVPSAIYVWIGKNCEPIMEREAKWAALQVVRYERVQGQRIKIEEGEEPSEFWDAFCNLPPSVDKSGSGVQVESAVKIGPGDRKVDLYDPDFELFQKAITGGVVPPFSSSGAGHETHLPARESNWSVLRRKFASGNVKEFVSAPKVALCRVYSDSMLIVDSNSHVNKIRPFSASSSSLSSPTYLSPSSLSSNSSTSSKFSSESLSPSTSSRSLTPSPASSTLSDSSLLSSKKSLHPIPNSPEAIGVIPTSKPCSQAVPSPSKRFALSLAERRGSLSPSLKLSALNDGVSLSSRREKNASSTCFAIQQDGFRRINNSCSLDERCDKEEFLESRGETANEEGDVTQEGQLLICSSGSTIDGTCCKEGALVKTLGEHLRNYPLQVEREFSVLTGLVANGSEICNPMQPLVFRWPDLEKFAAFGAGDLDSKSAFLFLAPSTGVSKHKDRMLYLWVGKSFKHDNSWIQLNKNKDLCEVEEIDWNQVGCAFLTLMGLPNDIPIKVVKEQEELGDFLVLLNSL*	861

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl05g01363	860	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	216	277	IPR000387	GO:0016311\|GO:0016791
	Eupl05g01363	860	MobiDBLite	consensus disorder prediction	99	141	-	-
	Eupl05g01363	860	Gene3D	Protein tyrosine phosphatase superfamily	142	299	IPR029021	-
	Eupl05g01363	860	ProSitePatterns	Tyrosine specific protein phosphatases active site.	241	251	IPR016130	GO:0016311\|GO:0016791
	Eupl05g01363	860	MobiDBLite	consensus disorder prediction	531	580	-	-
	Eupl05g01363	860	SMART	dsp_5	157	296	IPR020422	GO:0006470\|GO:0008138
	Eupl05g01363	860	Gene3D	Severin	308	404	IPR029006	-
	Eupl05g01363	860	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	157	299	IPR020422	GO:0006470\|GO:0008138
	Eupl05g01363	860	MobiDBLite	consensus disorder prediction	531	602	-	-
	Eupl05g01363	860	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	152	298	IPR029021	-
	Eupl05g01363	860	SUPERFAMILY	Actin depolymerizing proteins	304	404	-	-
	Eupl05g01363	860	Pfam	Dual specificity phosphatase, catalytic domain	165	295	IPR000340	GO:0008138\|GO:0016311
	Eupl05g01363	860	PANTHER	MKPA PROTEIN	14	856	-	-
	Eupl05g01363	860	CDD	DSP	158	292	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl05g01363	Eupl-Chr5	36643697	36655856	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl05g01363	1	193	Protein tyrosine phosphatase (PTP) family	AT3G55270	59.799	3.87e-62	223

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl05g01363	-		-	ming:122069385	1110.9