Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01357 ATGATGATATCAAGAGGGTTATTCGGGTGGTCTCCGCCACACATACAGCCGTTAACGCCGGTTTCAGAGGTTTCAGAGCCGCCGGAGTCGCCCTCTCCGTATTTGGATTCGAACACGGAGCCGATGCCGGTGGAGGATGAAGGGGGAATTGAAGAGGCGGAGGAGATCGAGCCACCGCCTGCTGCTGTGCCGTTCTCCAGGTTATTTGCCCATGCCGATGGGTTTGATTGGTTTCTGATGGTTGTGGGATCGTTGGCTGCTGCTGCTCATGGGACGGCCCTTGTTGTGTATTTGCATTTCTTCGGGAAGGTTATTCAGTTGCTAAGCTTTAAGGATCCTTTGCAGAATCATGACGAGCTGTTTAGAGAGTTTACTCAGCATGCTCTATATATTATTTACATAGCTTCGGGTGTTTTTGCTGCTGGTTGGATTGAGGTATCATGCTGGATTCTTACTGGAGAGAGGCAGACCGCAGTCATCAGGTCAAAGTATGTTCAAGTATTGCTTAACCAGGACATGAGTTTTTTTGACACCTATGGGAACAACGGGGACATTGTGAGCCAAGTATTGAGTGATGTGCTGCTTATTCAGTCTGCTCTTAGTGAGAAAGTTGGAAATTATATTCATAATATGGCGACGTTTTTCGGTGGCCTTGTGATTGGATTGATCAACTGCTGGCAGATTGCACTCATAACATTAGCCACAGGTCCATTTATCGTTGCTGCAGGTGGAATATCTAACATCTTTCTCCACAGGCTTGCTGAAAATATTCAAGATGCATATGCTGAAGCAGCAAGCATTGCTGAACAGGCTATCTCTTACATTAGGACTTTATATGCGTTCACAAATGAAACATTGGCCAAGTATTCTTATGCTACTTCACTACAAGCAACACTGAGATATGGTATATTGATAAGTCTTGTGCAAGGTCTTGGACTGGGATTTACATATGGACTCGCAATATGTTCATGTGCTCTGCAACTTTGGGTTGGAAGATTCCTGGTTTCAAATGGAAATGCCCAAGGCGGTGAAATTATAACGGCTCTGTTTGCTGTAATTTTGAGTGGCCTTGGTCTGAATCAAGCAGCAACAAACTTCTATTCATTTGAGCAAGGGAGAATCGCTGCTTATAGACTTTATGAGATGATAAGCCGTTCAACATCTTCTGTCAATCAGGATGGAAATACCTTAGTTTCTGTGCAAGGAAACATTGAGTTTCGGAATGTGTATTTCAGCTATCTCTCTCGTCCTGAAATACCTATCTTAAGTGGGTTTTACCTGACTGTACCTGCTAGAAAAACTGTAGCACTTGTTGGTAGGAATGGCTCAGGAAAAAGCAGTATAATTCCTCTCATGGAACGGTTTTATGATCCTACATTAGGAGAAGTCCTTTTGGATGGTGAGAATATTAAAGGCCTTAAACTAGAATGGTTAAGAAGCCAAATCGGACTGGTCACCCAGGAACCTGCGTTGCTAAGTTTGAGTATTAGAGACAACATTGCTTATGGACGGTCCAGTGCTACTTCTGACCAGATTGAAGAAGCTGCTAAAATTGCGCATGCACATACATTTATCAGCTTGCTTGAGAAAGGATATGAAACACAGGTGGGTAGAGCTGGTTTGGAATTAACGGAAGAACAGAAGATAAAACTTTCTGTTGCCAGGGCAGTGCTTTCCAATCCATCTATTCTTCTGCTTGATGAGGTCACTGGTGGCCTTGACTTTGAAGCAGAAAAGGCTGTTCAGGAGGCTCTAGATATCCTCATGTTGGGCCGATCAACTATAATAATAGCTCGACGGCTTAGCCTTATTAGGAATGCTGATTATATAGCCGTGATGGAGGAGGGCCAACTTGTTGAAATGGGTACACATGATGAATTGTTAACCCTGGATGGCCTATATGCAGAACTTCTTAGATATGAAGAAGCAGCAAAACTTCCTAAGAGGACGCCGATAAGGAACTACAAGGAGGGCACAACTTTCCAAATTGAAAAAGATTCATCAGCAAGTCACAGCTTTCAAGAGTCATCATCGCCTAAGATAGTTAAATCACCCTCTCTTCAGAGGGCGCATGCTGTCCATGCATTTCACCCACCAGATGGCACCTTTAGCTCGCAAGAATCGCCAAAAGTTCAGAGTCCACCTTCAGAGCAAATGCTGGAAAATGGGATGCCCCTGGATGCAGCAGATAAGGCACCATCCATAACAAGGCAGGATAGTTTTGAAATGAGATTACCCGAGCTACCGAAAATTGATGTTCATTCTGCAAATCGACAGACGTCAAATGCTTCAGACCCCGAATCCCCTGTTTCACCACTTTTGACATCTGATCCAAAAAATGAACGCTCCCATTCAAAGACTTTTAGTCGACCCCTTAGTCAATATGATGACATGCCTGTAAAGCAAAGGGAGTCAAAGGATACACAACATCAGAAATCCCCTTCATTTTGGAGGCTTGCCGAGCTCAGCTTTGCAGAGTGGCTTTACGCCCTTTTAGGGAGTACTGGTGCTGCTATTTTCGGTTCTTTCAATCCTCTTCTTGCTTACGTTCTTGCACTGATTGTGGTGGCATATTATAGAGATGATCATCATCTACCCCATGAAGTGGACAAATGGTGCTTGATCATTGCATGCATGGGTATTGTTACTGTGGTAGCCAATTTTTTGCAGCACTTCTATTTTGGTATAATGGGGGAGAAAATGACTGAACGAGTTAGGAGAATGATGTTCTCAGCAATGTTGCGCAATGAAGTTGGATGGTTTGATGAAGAGGAGAACAGCGCTGACACCTTGTCCATGCGCCTGGCAAATGATGCAACATTTGTTCGGGCTGCTTTCAGCAACCGACTTTCTATATTTATACAGGACACTGCAGCTGTTGTTGTGGCTGTTCTAATTGGGATGTTGTTGGAATGGCGATTGGCACTTGTTGCCTTGGCAACCCTACCCATTCTTACTGTTTCTGCTATTGCACAGAAGCTGTGGCTTGCAGGGTTCTCGAGAGGTATTCAGGAGATGCACAGGAAGGCATCTTTGGTCCTTGAGGACGCAGTTAGAAACATATACACTGTAGTGGCATTCTGTGCTGGTAACAAGGTTATGGAGCTCTACAGATTGCAGCTAGTAAAAATATTCAAGCAGAGCTTCTTCCATGGAATGGCTATTGGTTTTGCCTTTGGCTTTTCTCAGTTTCTGCTTTTTGCCTGTAATGCACTCCTCCTCTGGTACACTGCTATCTGTGTTAAAAATGGCCATCTGGATCTGCCCACAGCTCTCAAGGAGTACATGGTGTTCTCTTTTGCCACGTTTGCACTGGTGGAGCCTTTTGGCTTGGCTCCATACATACTTAAACGGCGAAAATCCCTCGCTTCGGTGTTTGAAATCATTGACCGTGTCCCTAAGATTGATCCAGACGATAACTCTGGACTGAAACCCCCTAACGTCTATGGAAGCATAGAACTGAAAAATGTTGATTTCTGTTATCCAACTCGTCCGGAGATGATGGCTGAACTCAAGGTTAATTGTGTCGCAGTTGCAAACAATTTAAATACAGCTGAATGCCAGGTTATTTGCGTCACGGTTGCAATAGAGTCGGTAACCAAATAG 3606 0.442 MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDSNTEPMPVEDEGGIEEAEEIEPPPAAVPFSRLFAHADGFDWFLMVVGSLAAAAHGTALVVYLHFFGKVIQLLSFKDPLQNHDELFREFTQHALYIIYIASGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFGGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAISYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVSNGNAQGGEIITALFAVILSGLGLNQAATNFYSFEQGRIAAYRLYEMISRSTSSVNQDGNTLVSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKGLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRSSATSDQIEEAAKIAHAHTFISLLEKGYETQVGRAGLELTEEQKIKLSVARAVLSNPSILLLDEVTGGLDFEAEKAVQEALDILMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRYEEAAKLPKRTPIRNYKEGTTFQIEKDSSASHSFQESSSPKIVKSPSLQRAHAVHAFHPPDGTFSSQESPKVQSPPSEQMLENGMPLDAADKAPSITRQDSFEMRLPELPKIDVHSANRQTSNASDPESPVSPLLTSDPKNERSHSKTFSRPLSQYDDMPVKQRESKDTQHQKSPSFWRLAELSFAEWLYALLGSTGAAIFGSFNPLLAYVLALIVVAYYRDDHHLPHEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDTAAVVVAVLIGMLLEWRLALVALATLPILTVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLVKIFKQSFFHGMAIGFAFGFSQFLLFACNALLLWYTAICVKNGHLDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLASVFEIIDRVPKIDPDDNSGLKPPNVYGSIELKNVDFCYPTRPEMMAELKVNCVAVANNLNTAECQVICVTVAIESVTK* 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01357 1201 Coils Coil 250 270 - -
Eupl05g01357 1201 FunFam ABC transporter B family member 6 771 997 - -
Eupl05g01357 1201 Gene3D ABC transporter type 1, transmembrane domain 67 653 IPR036640 GO:0005524|GO:0016020
Eupl05g01357 1201 Gene3D - 394 642 IPR027417 -
Eupl05g01357 1201 MobiDBLite consensus disorder prediction 797 811 - -
Eupl05g01357 1201 MobiDBLite consensus disorder prediction 755 812 - -
Eupl05g01357 1201 Pfam ABC transporter transmembrane region 839 1098 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl05g01357 1201 Pfam ABC transporter transmembrane region 82 354 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl05g01357 1201 MobiDBLite consensus disorder prediction 663 684 - -
Eupl05g01357 1201 MobiDBLite consensus disorder prediction 701 719 - -
Eupl05g01357 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 393 640 IPR027417 -
Eupl05g01357 1201 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 831 1121 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl05g01357 1201 CDD ABC_6TM_Pgp_ABCB1_D1_like 80 379 - -
Eupl05g01357 1201 Pfam ABC transporter 425 570 IPR003439 GO:0005524
Eupl05g01357 1201 Gene3D ABC transporter type 1, transmembrane domain 793 1161 IPR036640 GO:0005524|GO:0016020
Eupl05g01357 1201 SUPERFAMILY ABC transporter transmembrane region 60 379 IPR036640 GO:0005524|GO:0016020
Eupl05g01357 1201 MobiDBLite consensus disorder prediction 663 730 - -
Eupl05g01357 1201 CDD ABC_6TM_Pgp_ABCB1_D2_like 826 1135 - -
Eupl05g01357 1201 PANTHER ABC TRANSPORTER B FAMILY 51 642 IPR039421 -
Eupl05g01357 1201 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 81 371 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl05g01357 1201 SMART AAA_5 431 611 IPR003593 GO:0016887
Eupl05g01357 1201 FunFam ABC transporter B family member 20 67 407 - -
Eupl05g01357 1201 SUPERFAMILY ABC transporter transmembrane region 818 1137 IPR036640 GO:0005524|GO:0016020
Eupl05g01357 1201 FunFam ABC transporter B family member 20 394 642 - -
Eupl05g01357 1201 FunFam ABC transporter B family member 6 999 1149 - -
Eupl05g01357 1201 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 404 640 IPR003439 GO:0005524
Eupl05g01357 1201 MobiDBLite consensus disorder prediction 18 55 - -
Eupl05g01357 1201 MobiDBLite consensus disorder prediction 755 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01357 Eupl-Chr5 36518034 36540483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01357 56 690 Calmodulin-binding Proteins AT2G36910 44.012 1.24e-171 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01357 K05658 - nnu:104594633 2048.09