Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01327 ATGGGAGAAGGATTTGTCTGTTTAACAGTATTAACTGATGGCAAGATGGCGGATGAGAATTCTTCCAGAATCGAATCGAAGCGTTCTCACGAATGGGTTGAAGGTGCTATTGAGCCCGAGACTTTCCCCAACAAGAAGTTATTGAAAGAAAATTCAAATGACGAATCAAATTCGGAAGTTTTGAATCCAATTGTATCTCCCCAGGGAAATGCTTCCAGTAGTCAAATTGTTTCAAGCCAACCCATTGACGAGTTATTAAGATCCGGTTGTGGGGATATCCCATCTACCATTACAGGGAATTCAAGTACAGAGAGCACAGACAATGAGGAACATGGTATAAATGATTCTTATGTTTCTCCTTCTACCTCTAAAGTGATATTGGAAGCTTCCAAACCCGCCAGCTCCTGCGGAATTAGAAGAATAATATTCAAATTCAGCAAGAGCAAGGACCCTAACAATGCAGTACCCACTTCAACTAGTCAGCCTGTAAGTACGGGGGTTGACAATGATCTCTCTTACGGCAGTTTTCATGCGGAACCCGAAATGAACCCCTCAGAATTCATTAATTCAAGTGCAGATATGTTTGCGGGTACCTCCAGAACGGGCATTTCTGAAACCGAACCTCTTCTTCTTTGTGCTCCTAAGAAGAAGATGGAATCAAAAATGTCAAAGAAGATTGTATTGAACAGCTACCCTACTAACGTGAGAAAGTTGTTGTCAACTGGCATTCTTGAAGGAGTTCCTGTGAAGTATATTAAACAGGAGAAAGAGCTGCTTCGTGGAATTATAAAAGGTTGCGGATATTTGTGTGCCTGTTCATTATGTAATTTTTCTAAAGTACTCAATGCTTATGAGTTTGAACAGCATGCTGGTTGCAAAACGAAACATCCAAATAATCATGTATTTTTGGACAATGGGAATTCAATTTATAGCATTGTCCAAGAGCTAAGGAATACCCCTCTCAGCTTGTTGGGTGATGTGATTCAAGCTGTCGCTGGTCCATCAGTCAATGAGAAGTCCTACCAGGTTTGGAAAGAGTCATTTCAAGCAGAAAATCTTCAACCAATTGATGGAAACGATGAAACAGACAAACAATCTCAACTGAAGCTTCTTGACTTCCCTCACTCAATTGTAAGCTGCCCTATTCAAGCTACTGAGGACAACCTTGGTCCTTCTCCAAGTTCCTTGGTGCAAAAGTTCACTGACAAACAAAAGAGTTCTATGATGCAAGAGACACCCAAAGAGTGGAAACCAGAGGCAAAGAAGCCAACAATGCCAAGTCAGCTGTGTACACAAAACTTCAACACTTCTAACTCAGTTGTGCTAAAGAAGAATACTACTGAAGGTGGGGCTAAGAAATTTCCAAAAAAACAAAAAGGTGGGGCTAAGAAAAGGGATAATGATTTGCACCGGTTACTTTTTATGCCAAATGGACTTCCAGATGGAGCTGAATTGGCTTACTATTCAAAAGGACAGAGATTACTTGAGGGCTATAAGCAGGGAAATGGTATAGTATGTAGTTGTTGTGACAGTGAGATTAGCCCCTCACAGTTTGAAGCTCATGCTGGATGGTCTACTAGGCGTCAACCCTATCGTCACATCTATACCTCTAATGGACTGTCTCTTCACGATCTATCAACTTCTCTGGCAAATGGTCAGAATCTTGCTACTGGCGACAGTGATGACATGTGTACAGTATGTGGAGATGGCGGTGACCTGATCCTTTGTGATGGATGTCCTCGGGCTTTTCATACAGTTTGTTTGGAACTACAGTTCGTCCCTGAATGTGATTGGTACTGTCCATATTGCAAAGATAAATTCGGGCCCGCTGGAAAGGCAGCTCTCAGCGAAACCTCTACTTTTGCCAGACCGATTACCATACGATTGACACGGGTTGTTAAAGTACCGGTAACTGACATAGGTGGTTGTGCTGTTTGCAGGGCCCATGACTTCAGCGTATCAAAATTTGGTGAGCGAACAGTTATGCTCTGTGACCAATGTGAGAAGGAATACCATGTAGGTTGTTTAAGGGATCGTGGATTATGTGATTTGAAGGAACTACCCAAGGGCAAGTGGTTTTGTTGTGAGGACTGCAATAGGATCCATGCTGATTTACAGGATTTACTGTTTAGTGGGGCAGAGATAATTCCTGCTTCACTGACAAGTACAATAAACATGAAGCTTCTTGAGAAAGGCCTAACTGATGAAGTTGGGAATGATGTGCACTGGCAACTTTTAAGTGGGAAAACTGGGTCATTAGACCATCGACCATTGCTTTCTAAGGCTGCTGCGATCTTTCGTGACTGTTTTGATCCGATAGTTGAAAGGTCCGGTCGTGATCTAATACCTGCCATGGTCTATGGGCGAAACATAGCTGGGCAAGAATTTGGGGGGATGTATTGTGCAGTTTTAAGTGTGAAGTCGGTTGTTGTATCGGCTGGAATTCTCCGAATTTTCGGTCAGGAGGTTGCGGAACTTCCTCTGGTAGCTACAACTAAAGAAAACCAAGGAAAGGGTTATTTCCAAGCATTATTCTCATGCATTGAGAGGCTCCTGTGCTGCTTGAATGTGGAGAACCTTGTACTTCCTGCTGCTGAGGAAGCTGAATCAATCTGGATAAATAAATTTGCCTTCAGAAAGATGACCGAGGAGCGATTGCTGAAGTATACAAAGGACCTCCAGCTGACGATTTTCCAGGGGACTTCAATGTTAGAGAAGGTCGTGCCGAGGATTGCAGAATAA 2742 0.4274 MGEGFVCLTVLTDGKMADENSSRIESKRSHEWVEGAIEPETFPNKKLLKENSNDESNSEVLNPIVSPQGNASSSQIVSSQPIDELLRSGCGDIPSTITGNSSTESTDNEEHGINDSYVSPSTSKVILEASKPASSCGIRRIIFKFSKSKDPNNAVPTSTSQPVSTGVDNDLSYGSFHAEPEMNPSEFINSSADMFAGTSRTGISETEPLLLCAPKKKMESKMSKKIVLNSYPTNVRKLLSTGILEGVPVKYIKQEKELLRGIIKGCGYLCACSLCNFSKVLNAYEFEQHAGCKTKHPNNHVFLDNGNSIYSIVQELRNTPLSLLGDVIQAVAGPSVNEKSYQVWKESFQAENLQPIDGNDETDKQSQLKLLDFPHSIVSCPIQATEDNLGPSPSSLVQKFTDKQKSSMMQETPKEWKPEAKKPTMPSQLCTQNFNTSNSVVLKKNTTEGGAKKFPKKQKGGAKKRDNDLHRLLFMPNGLPDGAELAYYSKGQRLLEGYKQGNGIVCSCCDSEISPSQFEAHAGWSTRRQPYRHIYTSNGLSLHDLSTSLANGQNLATGDSDDMCTVCGDGGDLILCDGCPRAFHTVCLELQFVPECDWYCPYCKDKFGPAGKAALSETSTFARPITIRLTRVVKVPVTDIGGCAVCRAHDFSVSKFGERTVMLCDQCEKEYHVGCLRDRGLCDLKELPKGKWFCCEDCNRIHADLQDLLFSGAEIIPASLTSTINMKLLEKGLTDEVGNDVHWQLLSGKTGSLDHRPLLSKAAAIFRDCFDPIVERSGRDLIPAMVYGRNIAGQEFGGMYCAVLSVKSVVVSAGILRIFGQEVAELPLVATTKENQGKGYFQALFSCIERLLCCLNVENLVLPAAEEAESIWINKFAFRKMTEERLLKYTKDLQLTIFQGTSMLEKVVPRIAE* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01327 913 SUPERFAMILY FYVE/PHD zinc finger 642 696 IPR011011 -
Eupl05g01327 913 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 797 871 IPR016181 -
Eupl05g01327 913 CDD PHD1_AIRE 563 603 - -
Eupl05g01327 913 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 639 701 IPR013083 -
Eupl05g01327 913 SMART PHD_3 642 699 IPR001965 -
Eupl05g01327 913 SMART PHD_3 563 604 IPR001965 -
Eupl05g01327 913 ProSitePatterns Zinc finger PHD-type signature. 564 603 IPR019786 -
Eupl05g01327 913 SUPERFAMILY FYVE/PHD zinc finger 559 608 IPR011011 -
Eupl05g01327 913 ProSiteProfiles Zinc finger PHD-type profile. 561 606 IPR019787 -
Eupl05g01327 913 PANTHER AUTOIMMUNE REGULATOR 16 906 - -
Eupl05g01327 913 FunFam PHD zinc finger protein 641 701 - -
Eupl05g01327 913 FunFam PHD finger family protein 740 907 - -
Eupl05g01327 913 Pfam PHD-finger 563 605 IPR019787 -
Eupl05g01327 913 MobiDBLite consensus disorder prediction 93 118 - -
Eupl05g01327 913 MobiDBLite consensus disorder prediction 54 82 - -
Eupl05g01327 913 Pfam Tify domain binding domain 497 545 IPR032308 -
Eupl05g01327 913 Pfam Tify domain binding domain 261 316 IPR032308 -
Eupl05g01327 913 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 551 625 IPR013083 -
Eupl05g01327 913 MobiDBLite consensus disorder prediction 403 430 - -
Eupl05g01327 913 MobiDBLite consensus disorder prediction 43 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01327 Eupl-Chr5 36136263 36154388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01327 1 913 PHD Transcription Factor Family AT3G53680 49.083 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Eupl05g01327 TDBD 4.2e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01327 - - nnu:104599305 1155.2