Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01305 ATGTCTTCAGCTCAGGATCCATTTTACATTGTTAAAGAGGAGATTCAGGAATCTGTTGATAAGCTGCAATCTACTTTTCATAAATGGGAAAGTATCCCTTCAAACACTGGAGAGTGGGTCCATCTCACAAAGGAGCTCACTGCCAGTTGTGAAAGCATTGAATGGCAGGTGGATGAGTTGGACAAGGCAATTGCTGTAGCGGCTAGAGATCCTGCTTGGTATAGCATTGATGAAGTGGAGCTTGAAAAACGAAGGAGATGGACCAGCACTGCTCGTACTCAGGTGGGTACTGTGAGGAAAGCCGTAGATGCTGGGAAGGAGCAGAGCAACACAGTCAGTACCAGTCTAAATGGCATGCGCCAAGAGCTAATGAGGCTTCCAAATGATCGTCCTTATCAAGCAGACAGATCCAACCAGTATGGTGCCCAAGATAATGATGATTTCATATCAACAGAATCAGATAGGCAGCTGCTTCTTATAAAGCAACAGGATGAAGAACTGGATGAATTAAGTGCGAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACTATACATGAAGAACTCATTGGACAGGAGAAGATTATACATGAATTTGGCTTGGATATGGAGAGTACTTCCAATCGTCTTGATTTTGTTCAGAAAAAGGTGGCTTTGGTTATGAAGAAGGCGGGAGCGAAGGGGCAGATTATGATGATAGTGTTTTTGGTAATTCTGTTTATTGTTCTGTTCGTCTTGGTCTTCTTCACCTAG 750 0.4373 MSSAQDPFYIVKEEIQESVDKLQSTFHKWESIPSNTGEWVHLTKELTASCESIEWQVDELDKAIAVAARDPAWYSIDEVELEKRRRWTSTARTQVGTVRKAVDAGKEQSNTVSTSLNGMRQELMRLPNDRPYQADRSNQYGAQDNDDFISTESDRQLLLIKQQDEELDELSASVERIGGVGLTIHEELIGQEKIIHEFGLDMESTSNRLDFVQKKVALVMKKAGAKGQIMMIVFLVILFIVLFVLVFFT* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01305 249 CDD SNARE_NTD_AtSYP61-like 5 102 - -
Eupl05g01305 249 Pfam SNARE domain 201 245 IPR000727 -
Eupl05g01305 249 FunFam syntaxin-61 isoform X1 160 221 - -
Eupl05g01305 249 CDD SNARE_Qc 160 217 - -
Eupl05g01305 249 Gene3D - 2 105 - -
Eupl05g01305 249 SMART tSNARE_6 152 219 IPR000727 -
Eupl05g01305 249 FunFam Syntaxin 10 3 105 - -
Eupl05g01305 249 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 157 219 IPR000727 -
Eupl05g01305 249 Pfam Syntaxin 6, N-terminal 6 98 IPR015260 GO:0016020|GO:0048193
Eupl05g01305 249 PANTHER SYNTAXIN 12 238 IPR045242 -
Eupl05g01305 249 Gene3D - 164 228 - -
Eupl05g01305 249 SUPERFAMILY SNARE fusion complex 156 219 - -
Eupl05g01305 249 SUPERFAMILY t-snare proteins 5 102 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01305 Eupl-Chr5 35739427 35747294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01305 56 249 SNARE and Associated Proteins AT1G28490 66.495 2.63e-89 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01305 K08500 - msin:131249214 382.874