Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01291 ATGGAAGATAAAAATGTTGATGTGTCGATTTCCGGTGGAGCTCCGGCAAGTTCTAGGTGGAATCCGACAAAAGAGCAGATAAGCATGCTTGAGGGTTTGTATAGGCAAGGAATTAGGACGCCAAGTGCTGAGCAGATACAACAGATTACCACTAGGCTCAAGGTGCATGGTCACATAGAAGGGAAGAATGTGTTTTACTGGTTTCAGAATCATAAGGCAAGGCAGAGGCAGAAGCAAAAGCAGGAGAGCATGGTTTATACCAATCGGTTTCTACATAAGGCTGCACCCATTTTCGTTCCACCTCCTTGCACCAACGTTGTTTGCAGCCCATTTTACATACCACAGAGTGGTATTGGGTATTATCCTCAGTATCCGAATGAGCTGCTGCCTGGTGGCGTGAGGAGAGCAAGGATAGATAAAGTGGAGAAGAGGATGGAGAGTGCTGGTGCAGGATACGAACGTGCGCAACCCCGATATGATATGATGCACGGAGGTGACGATGAAACGTTACAGCTATTTCCATTGCACCCAACTGGCATTTTGGAGGGAAGGTCTGGAAATTCATTCCCTTCATCTTCTGCTGAGAACTCTAATCCTTCAAGCTCGTCTGAGAATGGCGTTGAGGTGGGTTCTGGTGACCAACCTTTCTTTGATTTCTTCGCCGAACACGGATCTTCCGAAAGCGAATGA 690 0.471 MEDKNVDVSISGGAPASSRWNPTKEQISMLEGLYRQGIRTPSAEQIQQITTRLKVHGHIEGKNVFYWFQNHKARQRQKQKQESMVYTNRFLHKAAPIFVPPPCTNVVCSPFYIPQSGIGYYPQYPNELLPGGVRRARIDKVEKRMESAGAGYERAQPRYDMMHGGDDETLQLFPLHPTGILEGRSGNSFPSSSAENSNPSSSSENGVEVGSGDQPFFDFFAEHGSSESE* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01291 229 MobiDBLite consensus disorder prediction 1 21 - -
Eupl05g01291 229 MobiDBLite consensus disorder prediction 184 209 - -
Eupl05g01291 229 FunFam WUSCHEL-related homeobox 4 17 84 - -
Eupl05g01291 229 CDD homeodomain 19 79 IPR001356 GO:0003677
Eupl05g01291 229 SUPERFAMILY Homeodomain-like 17 85 IPR009057 -
Eupl05g01291 229 Gene3D - 17 86 - -
Eupl05g01291 229 ProSiteProfiles 'Homeobox' domain profile. 13 78 IPR001356 GO:0003677
Eupl05g01291 229 SMART HOX_1 15 82 IPR001356 GO:0003677
Eupl05g01291 229 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 12 218 IPR044555 GO:0003700|GO:0099402
Eupl05g01291 229 Pfam Homeodomain 17 77 IPR001356 GO:0003677
Eupl05g01291 229 MobiDBLite consensus disorder prediction 181 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01291 Eupl-Chr5 35587342 35588967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01291 10 221 Wox Gene Family AT5G59340 43.725 4.10e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Eupl05g01291 Homeodomain 1.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01291 - - nnu:104599372 289.656