Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01285 ATGGTTTTTACATCGGTTCCGGTCTATCTAGATCCACCCAACTGGCAGCAGCAAACAAATCATCAACCAGGAAGTAGCAGTGAGAATTCCCAGCTTCCGCCACCTCCTGGCGGAGGTGGCGCGGGCTCGATCAGGCCTGGTTCAATGACGGATCGAGCCCGGATGGCGAAGGTGCCACAGCCGGAGGCAGCATTGAAATGCCCACGGTGTGAATCTACCAATACAAAGTTTTGCTACTTCAATAATTACAGCCTCACGCAGCCTCGCCATTTCTGCAAGACCTGTCGACGGTACTGGACTAGAGGTGGCGCACTGAGGAACGTTCCGGTGGGTGGAGGTTGCCGAAGGAACAAGAGAAGCAAAGGCAGTAGCTCAAAATCTCAGGCCACTGCCGACCGCCAAACGGGTTCTGGTTCCACAAGTTCGATTCCCTCCCATAGCTGCACCACTGATATCATAGGCCATATGCCACCACAATTACCCTTCATGGCCTCTTTACATCATCTTACTGACTATGGTGCGGCAGACATCGGCCTGAATTTTTGTGGAATTCAACCTCCAATGGTGCCAACTGGTGTCAGTGGCGGGACAGACATGGATTTCCATATGGGAAGTAATTCAGGTGGTGGTGGTGGTACCATTATATCCACTGGCGGTGCCGAGCAGTGGCGACTACAGCAAGTGCAACAATTCCCTTTCCTGGCTGGTTTGGAGCCACCACCGGGGTTGTACCCATTTGAAGGTGAAGGTGTTGAGCCAACGACTTATGCCGGGGGAGTTGGTCAGCTTCGGGCCAAGCCATCGGGTAGTTCTTTGATTACTCAGCTAGCTTCAGTGAAAATGGAAGAAAATCAAGGGCTGAATTTATCAAGACAGTTTTTGGGTATTCCAGGAAATGATCAGTATTTGGGTGGTAATGCATGGACAGATCTCTCTTGTTTCACCTCTTCGTCGTCCACCAGCCATCTCTTGTAA 975 0.5128 MVFTSVPVYLDPPNWQQQTNHQPGSSSENSQLPPPPGGGGAGSIRPGSMTDRARMAKVPQPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGSSSKSQATADRQTGSGSTSSIPSHSCTTDIIGHMPPQLPFMASLHHLTDYGAADIGLNFCGIQPPMVPTGVSGGTDMDFHMGSNSGGGGGTIISTGGAEQWRLQQVQQFPFLAGLEPPPGLYPFEGEGVEPTTYAGGVGQLRAKPSGSSLITQLASVKMEENQGLNLSRQFLGIPGNDQYLGGNAWTDLSCFTSSSSTSHLL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01285 324 MobiDBLite consensus disorder prediction 109 150 - -
Eupl05g01285 324 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 43 157 IPR045174 GO:0003700|GO:0006355
Eupl05g01285 324 ProSiteProfiles Zinc finger Dof-type profile. 65 119 IPR003851 GO:0003677|GO:0006355
Eupl05g01285 324 Pfam Dof domain, zinc finger 64 119 IPR003851 GO:0003677|GO:0006355
Eupl05g01285 324 MobiDBLite consensus disorder prediction 11 33 - -
Eupl05g01285 324 MobiDBLite consensus disorder prediction 123 149 - -
Eupl05g01285 324 ProSitePatterns Zinc finger Dof-type signature. 67 103 IPR003851 GO:0003677|GO:0006355
Eupl05g01285 324 MobiDBLite consensus disorder prediction 11 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01285 Eupl-Chr5 35504753 35506518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01285 31 323 C2C2-Dof Transcription Factor Family AT3G55370 43.865 5.47e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl05g01285 zf-Dof 3.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01285 - - nnu:104594562 461.455