Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01280 ATGAGCAAAGCCTTGGCACAGAAGGGGTATTATAAGCAGAAGGGTGTGGTAGTTAAGGCGATAGACAAGTATGTTGGAGAAATAGAGATGATTGATAGCAAGCACATTCTTAGAATTGATCAAGAAGAGCTTGAAACGGTGATTCCACAAATTGGGAGTCTTGTGAGGATAGTTAACGGAGCTTACAGTGGATCAACCGCGAGGTTGCTATCAGTGGACACTGATAACTACTGTGCTAAGCTTCAGATAGAGAAAGGTATTTATGATGGGAGGATACTTCAGGCAGTCGACTATGAAGATATGTGCAAGATCGTCCAATGA 321 0.4237 MSKALAQKGYYKQKGVVVKAIDKYVGEIEMIDSKHILRIDQEELETVIPQIGSLVRIVNGAYSGSTARLLSVDTDNYCAKLQIEKGIYDGRILQAVDYEDMCKIVQ* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01280 106 Gene3D - 1 48 - -
Eupl05g01280 106 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 104 IPR037321 -
Eupl05g01280 106 FunFam DNA/RNA-binding protein KIN17, putative 49 105 - -
Eupl05g01280 106 Pfam KN17 SH3-like C-terminal domain 1 40 IPR041330 -
Eupl05g01280 106 CDD KOW_KIN17 51 104 IPR041995 -
Eupl05g01280 106 Gene3D - 49 105 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01280 Eupl-Chr5 35445593 35445913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01280 1 105 C2H2 Transcription Factor Family AT1G55460 71.429 5.90e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01280 K13102 - nnu:104588411 184.111