Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01273 ATGGAACTACTGAGCTCCTTCCCACCTCGACCAACCGGAAATCATTTCTCCGGCTTATTATCTCCGGTGAATTTGAGATTTGGGTTTGATCAGGAAAGTCGTACGGCGGCTTCTGAGCTGCCCGAAATTACAGAAGAGGGTGATGACAGAGTATACGTGGCTGTCGGGAAGTCAATAGAGAAAACGGTTTATTTGCTTCATTGGACTTTCCGGCGGTTTGGAAACCAAGAAATATGCCTTGTTCATGTTTACCAACCTTCTCCCACTATTCCGACCCTCTTAGGAAAGCTCCCTGCAAGTCGAGCAAACGAGGAATTGGTGTCTGCTTACCGAAGAGAGGAGAGGGAACAGACAAAGAAACTTCTATTTAATTATTTGAGCGTTTGTTGTAGAGCCAAGGTTAAAGCAAATGTCATTACAATTGAAAGTGGACAAGTTCATAAGGGCATTGTAGAGCTGGTGGATAGGCATGGTATTAGGAAGCTTGTTATGGGGGCAATGCCAGACAATTGCATGAAGGTGAAGAAGAGCTCTGGCAAGGGAAACTATGCTGCCAAAAAAGCCCCTCCATTCTGTGAGATCTGGTTTGTCAACAAAGGAAAACATGTCTGGACAAGGGAAGCTTCTGAAAGTCCAAGTTTTATGCCACCAATTCTAAGTCCACCAGAAACTGCACTAGCAGATAGATTAAGGTCTAAATCATCTCATAATCATAAGAATGAGATAATATTTAACCCTTCTTATCTTCAATCCAGCTATTCTACTACTGGTAGAGTTAGAAACTGGGTTCAGATGGAACCAGATCAACTGGAAGTGGCTTTGTCTACTACAGGATCCATTTTTATGGGTAGTGTTTCACAGAGCTCATCAAGTTCATACAGTAACAGTGCAGAATCCGAGACAATGGTAGAGGAAGAAAGCTTGTATAATCATCTTATAGAAGTCAGGAAAGAAGCTGAGACATCAAAGAATGAAGCATTTGCAGAGCTACTGAAGCGCAAAAGATTGGAAGCAGAAGCTGTGGAAGCTATCAACAAGGTCAAAGCTTTAGAAGCTGCTCACACACGTGAAGTTCAGCTAAGAAAAGAAGTTGAGGATGCACTGAGAACCACCCGACAGGAGCAAGAAGAGCTTCTGGAACAAACAGAAGAAATGTCGAGAAAGCTACAGAGGACAAAGAGAAATGTAGTTGTCCTCGACAGTCGTGCTCGAGAAGCAACCAGTCGCCATGAAGAAGCTGCTAGAGAATTTACTCTCATCCAAGCATCCCTAGCAACTCTCCAGCACGAAAGGCGAAAAATCCGACAGCAGAGAGAGGAAGCCATGCGGCAGCTTGGATGGTGGAAAAGTCATGGGCAAGCGGGAGCTCCAAACTTCAATGGCTTCAGCTTTGTCAACAACTCGTCAGAACTCACCGAATTTTGTTTGTCAGATCTGCAGACTGCAACATGCGACTTTTCGGAGAGCTTCAAGATTGGGCAAGGAGAATATGGTTGTGTTTATAAGGGGGAGATATTGGACAGGAGTGTTGCTATAAAGAAGCTGCATCCACTTAGCATGCAAGGCCAATCAGAGTTTCAACAAGAGGTTCAAGTTCTCAGCAAATTACAACATCCTCATCTGGTGACTTTGATCGGGGCATGCCCAGAAGCCTGGTCCCTAGTCTATGAGTACTTGCCCAATGGGAGTGTCCAAGACCACCTCTTTCGCAAAACCAAAACCCATCCTCTGACCTGGCAAACGCGAACTCGCATCGCTGCAGAAATCTCAAGTGCCCTTCTCTTCTTGCACTCTTCCAAACCCAAAAAGATCATCCACGGTGATCTCAAACCCGAAAACATCCTTCTTGATTTGAAGTTAAACTGCAAGATCGGGGATTTTGGGATTTGTCGGCTTTTCCCAGAGGAGAATGCACGTTGTTCAAGTTTCCGCAGGAGTACAGAACCAAAAAGAGCATTTCCATATACAGACCCAGAGTTGCAGAGGACTGGAGACCTGACACCAAAGTCTGACATCTACTCCTTTGGGGTCATTATTCTACAGCTACTCACAGGAAGGCCCCCGGTGGGGTTAGTAAGTGAGGTGCGTCGAGCCGTGTTATCTGGGGAATTGGAATCGGTTTTGGACCCATCTGCTGGAGAATGGCCCACGTTCGTTGCCAAGCAGTTGATGGATCTTGGGTTACAATGCTGTGAGATGAACAGTCGGGATCGGCCAGAGCTGACACCAACTGTGGTGAGGGAGCTGGAGCAGTTGCACCTCAGCAATGAGCGGCCAGTGCCATCTTTATTCTTGTGCCCAATTCTTCAGGAGATCATGCACGATCCTCATGTGGCGGCGGATGGGTTCACCTATGAAGGCGAGGCCTTGCGTGGATGGTTGAAAAATGGGCGCGAAACTTCTCCCATGACCAATATAAAATTGAGCCACGTGCATCTTACTCCTAACCATGTACTCCGTCTTGCTATTCAAGACTGGCTATGTGAATCTTAA 2493 0.4609 MELLSSFPPRPTGNHFSGLLSPVNLRFGFDQESRTAASELPEITEEGDDRVYVAVGKSIEKTVYLLHWTFRRFGNQEICLVHVYQPSPTIPTLLGKLPASRANEELVSAYRREEREQTKKLLFNYLSVCCRAKVKANVITIESGQVHKGIVELVDRHGIRKLVMGAMPDNCMKVKKSSGKGNYAAKKAPPFCEIWFVNKGKHVWTREASESPSFMPPILSPPETALADRLRSKSSHNHKNEIIFNPSYLQSSYSTTGRVRNWVQMEPDQLEVALSTTGSIFMGSVSQSSSSSYSNSAESETMVEEESLYNHLIEVRKEAETSKNEAFAELLKRKRLEAEAVEAINKVKALEAAHTREVQLRKEVEDALRTTRQEQEELLEQTEEMSRKLQRTKRNVVVLDSRAREATSRHEEAAREFTLIQASLATLQHERRKIRQQREEAMRQLGWWKSHGQAGAPNFNGFSFVNNSSELTEFCLSDLQTATCDFSESFKIGQGEYGCVYKGEILDRSVAIKKLHPLSMQGQSEFQQEVQVLSKLQHPHLVTLIGACPEAWSLVYEYLPNGSVQDHLFRKTKTHPLTWQTRTRIAAEISSALLFLHSSKPKKIIHGDLKPENILLDLKLNCKIGDFGICRLFPEENARCSSFRRSTEPKRAFPYTDPELQRTGDLTPKSDIYSFGVIILQLLTGRPPVGLVSEVRRAVLSGELESVLDPSAGEWPTFVAKQLMDLGLQCCEMNSRDRPELTPTVVRELEQLHLSNERPVPSLFLCPILQEIMHDPHVAADGFTYEGEALRGWLKNGRETSPMTNIKLSHVHLTPNHVLRLAIQDWLCES* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01273 830 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 70 166 - -
Eupl05g01273 830 Gene3D Transferase(Phosphotransferase) domain 1 559 759 - -
Eupl05g01273 830 Pfam Protein kinase domain 488 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01273 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 604 616 IPR008271 GO:0004672|GO:0006468
Eupl05g01273 830 CDD RING-Ubox_WDSUB1-like 761 816 - -
Eupl05g01273 830 Coils Coil 333 353 - -
Eupl05g01273 830 SMART serkin_6 486 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01273 830 Coils Coil 420 444 - -
Eupl05g01273 830 ProSiteProfiles Protein kinase domain profile. 486 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01273 830 CDD STK_N 51 200 - -
Eupl05g01273 830 Coils Coil 357 395 - -
Eupl05g01273 830 SUPERFAMILY Protein kinase-like (PK-like) 468 748 IPR011009 -
Eupl05g01273 830 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 760 830 IPR013083 -
Eupl05g01273 830 ProSiteProfiles U-box domain profile. 759 830 IPR003613 GO:0004842|GO:0016567
Eupl05g01273 830 SUPERFAMILY RING/U-box 757 829 - -
Eupl05g01273 830 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Eupl05g01273 830 Gene3D HUPs 50 173 IPR014729 -
Eupl05g01273 830 Gene3D Phosphorylase Kinase; domain 1 465 558 - -
Eupl05g01273 830 FunFam receptor-like protein kinase FERONIA 453 558 - -
Eupl05g01273 830 FunFam Os07g0541700 protein 559 647 - -
Eupl05g01273 830 SMART Ubox_2 763 826 IPR003613 GO:0004842|GO:0016567
Eupl05g01273 830 Pfam U-box domain 760 829 IPR003613 GO:0004842|GO:0016567
Eupl05g01273 830 PANTHER OS02G0152300 PROTEIN 51 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01273 Eupl-Chr5 35346799 35357338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01273 48 827 U-box Gene Family AT2G45910 39.606 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Eupl05g01273 Pkinase 2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01273 - - ming:122086690 1056.97