Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01272 ATGGGTAACGGCTTTTGTAAGGTTGGCTATTGCTTCACTGGAGCTCGCCGGCGACACAATATAGCCGTTGTGATATCGGATTCTCTGGATGAAGGGTTGGGTCACTCGTTCTGTTACGTTCGACCTGATGCGTGTCGTGTCTCTTCGTCGAAGGTTCATTCGGAGGAGGCCACCACGTTCCGATCAATCTCCGGTGCCTCTGTAAGTGCCAACACATCCACCCCTCTGTCTACTGCTTTTGTTGATCTCTATTCGTATAACAGTCTTGATCGAGCTGCGGCTTTTGAGAGCTCTACCTCTTTTGCTTCGATTCCCTTACAACCAGTCCCAAGGTGTTTGATGAATTCGGGCTCGTTATCGGGGAATTTGGGCGGAATTATGGGTTCAGGACCACTCGAGAGGGGATTTTTGTCGGGCCCAATTGAACGGGGGTTCATGTCAGGTCCGCTCGATCGTGGGTTGTTTTCGGGTCCTCTTGAAAAGGGGTCTGATCAGTTCCACAGGAGTTTTTCTCATGGGGCTTTTGCGTTTAGACCCAGATCCAGAAAAGGGACTTTGATACGGGTTATCCGAAGGGCGATTGCAAAGACAATATATCGTGGGCAGAATTCCATTGTCACCCCAGTTAAAGGGGTTGTTTCGGTTAAAGAATCTGATTGGGGTGTTGGGTCAGAGAAGAACGGCGAGTTTCTTACGGTGAGTAGTACTAATTTGAGCAGTGATGTGAGCTTGGACGATGACTTTTCGTTCGAAAGTCAGAACCTTCAATGGGCTCAAGGGAAGGCCGGGGAGGATCGAGTTCATGTTGTGATTTCGGAAGAACATGGATGGGTTTTTGTTGGAATTTATGATGGATTTAATGGTCCTGATGCTCCTGATTATCTTCTCTCTAATCTGTACCCTGCCGTTCATAAAGAACTCAAAGGATTGTTATGGGAAGACAACTACGAATCCACTGCCGCCACCACCACCACCACCAACACTGCCGCCGCAGCCACAGCCACAGCCACGGATTCTAATTTGGAAAAGGAGGTTTCAATTCAAACCGACGATTTTGATCACTCTAGAATAAGGAATCAGACAGTTGAGAGTTGCTCTCAATGTTTGGAGACGGAGAATTATCCAGCTGGGTGTGGGGATCTTAATTCGAATTCAAATTCGATTCACAAGAAGGGTAGGGGTAGGAATTCGAAGAACAGGTTTAAAGGGGCAGCGAAGAAATGGGCGGAGAGTCAGAGGAGGTGGAAGTGCGAATGGGATAGGGAGAGAATGGAGCTTGATCGGAGGCTGAAGGAACAATTAAGCCGCTCTGGTTCTGAAGGTGCAGCAGCTATTAACCATTCAGATGTCTTGAAAGCTCTTTCTCAGGCCTTGAAGAAGACAGAGGACTCCTATTTGGAGATTGCAGACAAGATGGTCATGGAGAATCCAGAGTTGGCTTTGATGGGTTCATGTGTTCTGGTGATGCTGATGAAGGGAGAGGATGTTTACTTGATGAATGTGGGTGATAGTCGTGCGGTATTAGCTCAGAAAGCGGAACCTGACCTTTGGCTTGGAAAGGCTCGCCAAGACTTGGAACGGATCAATGAGGAGACTTTGCATGATCTTGAAGCATGTGATGGTGATCAATCAGATGGATTACCCAACTTAACTGCTCTTCAGCTCACCCTGGACCATAGCACTTGTGTGAAAGAGGAAGTTCGGAGAATAAAGAATGATCATCCAGATGATAATTCTGCTGTCATGAACGATCGTGTGAAAGGTTCGTTGAAGGTCACACGAGCTTTCGGTGCTGGCTTTCTCAAACAGCCAAAGTGGAACAATGCACTTCTAGAGATGTTCAGAATTGACTATGTAGGAACATCCCCATACATTACCTGTTTTCCTTCCATGTACCACCACAGATTGGGTTCCAAGGACAGATTTTTGATACTGTCGTCCGATGGGCTCTATCAATACTTCACCAATGAAGAGGCAGTCTCCCAAGTCGAGCTGTTCATTGCTTCATCACCTGAAGGAGATCCAGCACAACACCTTGTTGAAGAAGTCCTGTTTCGTGCAGCAAAGAAAGCTGGTATGGACTTTCATGAATTGCTTGAAATACCACAAGGGGACCGTCGCCGGTACCATGATGATGTTTCCATCATAGTTATCTCTTTAGAGGGAAGGATATGGAGATCATGTGTGTAG 2190 0.4699 MGNGFCKVGYCFTGARRRHNIAVVISDSLDEGLGHSFCYVRPDACRVSSSKVHSEEATTFRSISGASVSANTSTPLSTAFVDLYSYNSLDRAAAFESSTSFASIPLQPVPRCLMNSGSLSGNLGGIMGSGPLERGFLSGPIERGFMSGPLDRGLFSGPLEKGSDQFHRSFSHGAFAFRPRSRKGTLIRVIRRAIAKTIYRGQNSIVTPVKGVVSVKESDWGVGSEKNGEFLTVSSTNLSSDVSLDDDFSFESQNLQWAQGKAGEDRVHVVISEEHGWVFVGIYDGFNGPDAPDYLLSNLYPAVHKELKGLLWEDNYESTAATTTTTNTAAAATATATDSNLEKEVSIQTDDFDHSRIRNQTVESCSQCLETENYPAGCGDLNSNSNSIHKKGRGRNSKNRFKGAAKKWAESQRRWKCEWDRERMELDRRLKEQLSRSGSEGAAAINHSDVLKALSQALKKTEDSYLEIADKMVMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAVLAQKAEPDLWLGKARQDLERINEETLHDLEACDGDQSDGLPNLTALQLTLDHSTCVKEEVRRIKNDHPDDNSAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGTSPYITCFPSMYHHRLGSKDRFLILSSDGLYQYFTNEEAVSQVELFIASSPEGDPAQHLVEEVLFRAAKKAGMDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01272 729 SUPERFAMILY PP2C-like 261 721 IPR036457 -
Eupl05g01272 729 ProSiteProfiles PPM-type phosphatase domain profile. 247 720 IPR001932 -
Eupl05g01272 729 Pfam Protein phosphatase 2C 428 685 IPR001932 -
Eupl05g01272 729 CDD PP2Cc 426 720 IPR001932 -
Eupl05g01272 729 PANTHER PROTEIN PHOSPHATASE 2C 245 718 IPR015655 GO:0004722|GO:0006470
Eupl05g01272 729 Gene3D - 238 725 IPR036457 -
Eupl05g01272 729 SMART PP2C_4 248 718 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01272 Eupl-Chr5 35340077 35343447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01272 1 729 PP2C-type Phosphatase Gene Family AT1G07630 65.241 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01272 - - nnu:104594549 1135.17