Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01252 ATGGCCGGACAATCTGACCCTCATCTATCAATCTTCTCTGCAGCGGAGGTGGAGTTTCTCGCGGAAGATGAAATAGTGGAGATTGTTCCGAATATGAACATGGACCCTCTAAATTTGATCTGCGGTGATTTTGGCCCTTTTCGGCCGCAAATAGCCACTGAAGTTCCGCTGTGGCTTGCAGTGGCTTTGAAGAAGAGGGGGAAATGCTCAATTCGCCCGCCCCAATGGATGTCTTGTGAAAAGTTGACACAGGTGTTGGAAGCAGAGCGTGATTCTCCTAGAGAATTTCAGCCACTACCTTTCCATTATGTGGAAATTTCAAGGCTTCTATTTGAACATGCACGTGATGACATCCCAGACATATATATGGTGAGATCTCTGATTGAAGACATTAAGGATGTAAGGTTTCATAAGGTTGAGACTGGCTTAGAGACAATTTCTGCTCGTACACATGCAGTCAAGCTAAAAAATCTATCTGCGATGGAAGTGAATATAGTGCGCCCATTCTTTGTGAGAGCCCTTCAGGCTTTCTATAAGCATGACAGTCCGCAGATGATACAGCAACCTGACCCAATGGCTACTAGACTGCCACAAGTAGCTGATCGCGGACCAAGACGGGATCTGAGGCGTCGGTAG 636 0.4654 MAGQSDPHLSIFSAAEVEFLAEDEIVEIVPNMNMDPLNLICGDFGPFRPQIATEVPLWLAVALKKRGKCSIRPPQWMSCEKLTQVLEAERDSPREFQPLPFHYVEISRLLFEHARDDIPDIYMVRSLIEDIKDVRFHKVETGLETISARTHAVKLKNLSAMEVNIVRPFFVRALQAFYKHDSPQMIQQPDPMATRLPQVADRGPRRDLRRR* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01252 211 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 7 205 IPR007257 GO:0005634|GO:0006260
Eupl05g01252 211 PIRSF GINS_PSF2 2 211 IPR007257 GO:0005634|GO:0006260
Eupl05g01252 211 CDD GINS_B_Psf2 13 74 - -
Eupl05g01252 211 Gene3D - 79 190 - -
Eupl05g01252 211 FunFam DNA replication complex GINS protein PSF2 78 193 - -
Eupl05g01252 211 Gene3D - 12 77 - -
Eupl05g01252 211 SUPERFAMILY PriA/YqbF domain 12 71 - -
Eupl05g01252 211 MobiDBLite consensus disorder prediction 184 211 - -
Eupl05g01252 211 CDD GINS_A_psf2 66 182 - -
Eupl05g01252 211 SUPERFAMILY GINS helical bundle-like 73 181 IPR036224 -
Eupl05g01252 211 FunFam DNA replication complex GINS protein PSF2 12 77 - -
Eupl05g01252 211 Pfam GINS complex protein 53 162 IPR021151 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01252 1 146 Core DNA Replication Machinery Family AT3G12530 72.603 1.27e-78 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01252 K10733 - nnu:104594043 364.77