Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01249 ATGGCTCCACGCGATATGGTTCTAATGGAATTGTCATCTCAAGCTAAGCCCATAGACTGTGTTAAAGGCCCAACTCCAGAGGCCCAGCCACTAAAGCCGCAAACTGAGCCAGACAAACCCAAGCCAACTGGCAGTAGGCAGAAAAACTGGGGAAGGAAGGAGTTTTTCGGGTTATTGTTTCTATGGGGAACTGCTGGAGCGCTCGAATCAAGGCCGAGACTCCATTTCAAACAGTCCACCAATGTAAAGAGCTTCAGCTTCAGCGAACTCAAAACCTCCACGAGGAACTTCCGCCCTGACAGTGTATTGGGAGAAGGTGGCTTTGGTTCGGTCTTTAAGGGGTGGATTGATGAGCATGCATTTACGGCTGCCAAGCCTGGAACGGGCATTGTTATTGCTGTAAAGAGGCTCAACCAAGAAGGGTTCCAGGGTCACAGGGAATGGTTGGTGAGGGGTTCTTACTTCCAACCACTTTCTTGGAACCTCCGTATGAAGGTTGCTCTTGGGGCTGCAAAGGGGCTTGCCTTTCTCCACAGTGCTGAAACAAAAGTAATATATCGGGACTTCAAGACTTCTAATATCCTTCTAGATTCGGACTACAATGCGAAGCTTTCTGATTTTGGGTTGGCCAAGGATGGTCCAACAGGTGATAAGAGCCATGTCTCTACTAGGGTCATGGGGACCTACGGATATGCTGCCCCCGAGTATCTAGCCACAGGTCATCTAACTGCCAAGAGTGACGTATACAGCTTTGGAGTTGTTCTTCTAGAAATGTTATCTGGTCGACGAGCAGTTGACAAGAACCGACCATCTGGAGAACACAACCTGGTGGAATGGGCCAAGCCTTACCTGACCAACAAACGTAAAATGTCCCGCATTTTGGACACCCGTCTTGAAGGTCAGTACTCATTGGGAGCAGCTCAGAAGGCAACTATCCTCGCCCTTCAATGTCTATCAACAGAAGCCAAGTTCAGGCCAAGCATGGACGAGGTTGTAACATCATTGGAGCAGTTTCAGGACTCCAAGGACTCAACAAGAAGCACTCAAAATGAACAAAACCCAAACCATCATCGCCATTCCAATGGTGAACCCAAGTACCACAGAAGAAGTGCAGAGAAAGCTCGTAATGAAAAGCCAGTTTCTTACCCAAGGCCATCCGCCTCCCCCCTTTATGCTTAG 1179 0.4877 MAPRDMVLMELSSQAKPIDCVKGPTPEAQPLKPQTEPDKPKPTGSRQKNWGRKEFFGLLFLWGTAGALESRPRLHFKQSTNVKSFSFSELKTSTRNFRPDSVLGEGGFGSVFKGWIDEHAFTAAKPGTGIVIAVKRLNQEGFQGHREWLVRGSYFQPLSWNLRMKVALGAAKGLAFLHSAETKVIYRDFKTSNILLDSDYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGEHNLVEWAKPYLTNKRKMSRILDTRLEGQYSLGAAQKATILALQCLSTEAKFRPSMDEVVTSLEQFQDSKDSTRSTQNEQNPNHHRHSNGEPKYHRRSAEKARNEKPVSYPRPSASPLYA* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01249 392 ProSitePatterns Protein kinases ATP-binding region signature. 103 135 IPR017441 GO:0005524
Eupl05g01249 392 MobiDBLite consensus disorder prediction 337 351 - -
Eupl05g01249 392 Gene3D Phosphorylase Kinase; domain 1 77 148 - -
Eupl05g01249 392 PANTHER OS01G0588500 PROTEIN-RELATED 53 150 - -
Eupl05g01249 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Eupl05g01249 392 Gene3D Transferase(Phosphotransferase) domain 1 149 363 - -
Eupl05g01249 392 MobiDBLite consensus disorder prediction 337 392 - -
Eupl05g01249 392 MobiDBLite consensus disorder prediction 13 49 - -
Eupl05g01249 392 FunFam Probable serine/threonine-protein kinase PBL8 144 355 - -
Eupl05g01249 392 Pfam Protein kinase domain 165 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01249 392 SUPERFAMILY Protein kinase-like (PK-like) 80 337 IPR011009 -
Eupl05g01249 392 ProSiteProfiles Protein kinase domain profile. 1 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01249 392 MobiDBLite consensus disorder prediction 352 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01249 Eupl-Chr5 35069828 35079061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01249 77 354 Glycoside Hydrolase AT3G07070 43.865 6.69e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl05g01249 Pkinase 1.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01249 - - nnu:104597190 522.702