Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01245 ATGAGATGCATGAAGGCCCCCGATATTATTTATATATACAGATTATACGGTATTCTCGATGTAAACTATGGTTTGAAGAATCTTGACGCCTGCGCCGGCCATCAGAGAGAGAGAGAGCAGATGGTGAGCGGGATATTGGAGGTGCAGCTCGTCGATGCACGAGGCTTGGGAGACTCTGATTTCTTGGGTAGGATGGATCCGTACGTGTTGATTCAGTACAGAAGCCAAGAGCGGAAGAGCAGCGTCGCTCAAGGAGCCGGTAGAAACCCAGTATGGAACGAGAGATTCAGTTTCCAAGTGCAGTATCCTGGTGCAGATGACCAGTACAAGCTCATCCTCAGAATCATGGACAAGGACACCTTCTCAGTCGACGACTTCGTCGGAGAAGCCGTGATCTATTTGAAGGATCTGATGGCATTAGGAGTGGAGAAGGGAACGGCTGAACTTCATCCTAGCAAGTATAGTGTCATCCACACTGACCGAACTTACTGTGGAGAAATTCGAGTAGGCATCACTTTCACTCCCAAGGTGGAAGAGGAAACGGAACAAGAAGAATTCGGAGGATGGAAGCAGAGCTACTTCTAG 585 0.4855 MRCMKAPDIIYIYRLYGILDVNYGLKNLDACAGHQREREQMVSGILEVQLVDARGLGDSDFLGRMDPYVLIQYRSQERKSSVAQGAGRNPVWNERFSFQVQYPGADDQYKLILRIMDKDTFSVDDFVGEAVIYLKDLMALGVEKGTAELHPSKYSVIHTDRTYCGEIRVGITFTPKVEEETEQEEFGGWKQSYF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01245 194 SMART C2_3c 45 146 IPR000008 -
Eupl05g01245 194 CDD C2_putative_Elicitor-responsive_gene 44 167 - -
Eupl05g01245 194 ProSiteProfiles C2 domain profile. 27 150 IPR000008 -
Eupl05g01245 194 Gene3D C2 domain 43 176 IPR035892 -
Eupl05g01245 194 PANTHER C2 DOMAIN-CONTAINING 41 185 - -
Eupl05g01245 194 Pfam C2 domain 44 143 IPR000008 -
Eupl05g01245 194 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 40 178 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01245 Eupl-Chr5 35028469 35033281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01245 32 149 C2H2 Transcription Factor Family AT4G21160 30.833 2.71e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01245 - - ming:122057905 236.884