Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01244 ATGACGAGCGGGATATTGGAGGTGTTGCTAGTCGATGCGTGTTGCATTAAAGACACTGAATTCTTCGGTAAAATGGATCCATACGTGTTGATTCGTTATGGAAATCAAGAGCGCATAAGCACTGTCGCCCGAGGACAAGGTAGGACTCCAGTATGGAATGAAAGATTTAATTTCGAGGTGGAGTATCCGGGGAAGGAAGATCATGAGTACAAGCTCACCTTCACGATCATGGACAAAGATACCTACACTGCCGACGACTTTGTTGGGGAATCAACGATCTACGTGAAGGATGTTCTTTCATTAGGTGTCGACAAGGGAATGGCTGAGATACGACCTACCAAGTATAGTGTCGTCCTTCATGATAAGACATACCGTGGAGATATTCGGGTCGGTGTTACTTTCACCCGAAAGATGGAAGAGGACAGGGACGAAGATCTTGGAGGATGGAAACGAAGTTCAATCTTTGAATGA 471 0.4544 MTSGILEVLLVDACCIKDTEFFGKMDPYVLIRYGNQERISTVARGQGRTPVWNERFNFEVEYPGKEDHEYKLTFTIMDKDTYTADDFVGESTIYVKDVLSLGVDKGMAEIRPTKYSVVLHDKTYRGDIRVGVTFTRKMEEDRDEDLGGWKRSSIFE* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01244 156 Gene3D C2 domain 2 136 IPR035892 -
Eupl05g01244 156 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 137 IPR035892 -
Eupl05g01244 156 PANTHER C2 DOMAIN-CONTAINING 1 141 - -
Eupl05g01244 156 Pfam C2 domain 4 100 IPR000008 -
Eupl05g01244 156 SMART C2_3c 5 107 IPR000008 -
Eupl05g01244 156 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01244 Eupl-Chr5 35024282 35026009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01244 26 110 C2H2 Transcription Factor Family AT4G21160 32.558 1.77e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01244 - - nnu:104602451 216.468