Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01243 ATGGCTAGAGCTAGTGGGATATTGGAGGTGCTGCTAGTTGATGCAAGACGCCTAAGAGACACAGAGCTCCTAGGTAAGATGGATCCGTACGTGTTGATACAGTATGGAAACCAAGAGCGCAAGAGCAGTGTCGCGCGAGGTTTGAATCCAGTATGGAACGAGAGATTTACTATCAAGGCGGAGTATCCAGGGGGAGCCAATGACCAATACAAGATCAACTTCAGAATCATGGACAAGGACACCTTCTCCAACAACGACTTTGTTGGCGAATCAACGATCTATGTAAAGGATGTTCTGGCATTAGGCATGGAGAAGGGAACAGCGGAACTACCACCTCACAAGTACAGGGTTGTCCTTGCGGATAAGACCTACCATGGAGAGATCCGAGTCGGCGTCACTTTCACCCGAGAGCGAGGAGAGGAGCAGCAGAAAAGACTAGACCTTGAGGAGGAGGTGGTTAAATTGCGAGCAGAATTAGATGAGGAACAGAAACTGAACAGGGTTCTGCAATGTGCATTACATGGACCCGTTGTTTCTCGTCCATCTTTTTCTTTGTTTCCACTTCAGGTACAGCTGCTTCTTGCCGAAGTAGCAATGGTGGAGGAACAGATAATTAGCCTAGAGAGAAAAATTGAAGAGTTGAAACTGGGTCTGTATCAAGAGAAGAAACAAAGCAAAGAGCGGGAAATGCTTCAACAACAGCAATATCGGTGGTGGGAACAGCAACAGAAGCACTACCTGTGTGGACTAGGAAGCCGAAGGGAGCTTCGAGATCTCGAGCAACCTTCAGGACCACCATGGAATAATGCAGTTTTCAGAAGCCAAAGATGGATAAGAGAGAGAAAAGCCTCACTTTGCTCTGCTTCAGAGATCCAAACCATGTCTTCCACAAGATCAAACGATGAGTTTGCAGAAAGATCAAGAAGATGCGATGAACAAAATCGAAACCAGAGCCTTATTGATAATGAAACACGTATCGAGAAGCCTAACAGACTCTCGGAAGAACTGATCAAGTGCTTGATAGGCATCTTTCTGAAACTGAACCAACCATCGGTGCAGGTCGACTGTGAAGGGTCAACTATTGTCCCCAAGCTTACTCTCTCCTGCATGAACACAAAAAACCATGTGTCCAAGACCTCATTCAAGTGTAAGGCACCCATGTTTTTCTTGGATGATAACACTTCAACTCTTGATCCTTACGGCATGCTGCCTGATCCCGATGGCACAGTCAGAGACTTTGGCCCATACAAGAACTTCATCCAATTCACAAGAATCTCATTGGACATGAGTTGTGTCTCAGAATGTTTTCCAGCAATCAGAAAATTAAGGGTTTTGATGCACAAACTTTGTAATGTGGACTTAAGTTTCTTGACGTACAAGCAAAAGTTAGCATTCTGGATCAACATCTACAATGCCTGCATAATGCATGCATTTCTCCAACATGGGCTGCCTTCCACACCAGACAAACTGCTTACATTGATGAACAAGGCTGCACTGAATGTGGGTGGAATTGTACTAAATGCTCTGGCCATTGAGCATTTCATTCTCAGGCATCCTTGTGACTCCAAAAATGGTGCAATGGATGAAAAAGAAATGCTGCTCCGGCATGCCTATGGTCTTGGGTATCCTGAACCCAATGTCACATTTGCTCTTTGCCGAGGCAGTTGGTCTTCACCGGCACTAAGGGTCTATACCACAGAGGATGTGGTGAACGAACTCGGAAGAGCAAAAGTGGAGTACTTAGAAGCTTCTGTAGGAGTTACAAGCAAGAAGAAAATTCTGGTGCCCAAGCTTCTCCACTGGCACATGAGAGATTTTGCAGACGACATGGACTCGTTGCTCGAGTGGATTTATAGCCAATTGCCACAGTCAGGATCACTGAAGAGATCAATAATGGAGTGCCTGAATGGGGAAACAAAACCTGCGATCGCTAAAATGGTTGAAATTCAGCCTTATGAATCTGAATTTCGTTACCTATTGCCCCTATAA 1989 0.453 MARASGILEVLLVDARRLRDTELLGKMDPYVLIQYGNQERKSSVARGLNPVWNERFTIKAEYPGGANDQYKINFRIMDKDTFSNNDFVGESTIYVKDVLALGMEKGTAELPPHKYRVVLADKTYHGEIRVGVTFTRERGEEQQKRLDLEEEVVKLRAELDEEQKLNRVLQCALHGPVVSRPSFSLFPLQVQLLLAEVAMVEEQIISLERKIEELKLGLYQEKKQSKEREMLQQQQYRWWEQQQKHYLCGLGSRRELRDLEQPSGPPWNNAVFRSQRWIRERKASLCSASEIQTMSSTRSNDEFAERSRRCDEQNRNQSLIDNETRIEKPNRLSEELIKCLIGIFLKLNQPSVQVDCEGSTIVPKLTLSCMNTKNHVSKTSFKCKAPMFFLDDNTSTLDPYGMLPDPDGTVRDFGPYKNFIQFTRISLDMSCVSECFPAIRKLRVLMHKLCNVDLSFLTYKQKLAFWINIYNACIMHAFLQHGLPSTPDKLLTLMNKAALNVGGIVLNALAIEHFILRHPCDSKNGAMDEKEMLLRHAYGLGYPEPNVTFALCRGSWSSPALRVYTTEDVVNELGRAKVEYLEASVGVTSKKKILVPKLLHWHMRDFADDMDSLLEWIYSQLPQSGSLKRSIMECLNGETKPAIAKMVEIQPYESEFRYLLPL* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01243 662 Gene3D C2 domain 4 136 IPR035892 -
Eupl05g01243 662 CDD C2_putative_Elicitor-responsive_gene 6 128 - -
Eupl05g01243 662 MobiDBLite consensus disorder prediction 301 316 - -
Eupl05g01243 662 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 135 IPR035892 -
Eupl05g01243 662 Coils Coil 190 217 - -
Eupl05g01243 662 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Eupl05g01243 662 SMART C2_3c 7 107 IPR000008 -
Eupl05g01243 662 Pfam C2 domain 6 100 IPR000008 -
Eupl05g01243 662 Pfam Leucine-zipper of ternary complex factor MIP1 141 221 IPR025757 -
Eupl05g01243 662 MobiDBLite consensus disorder prediction 297 316 - -
Eupl05g01243 662 Coils Coil 138 172 - -
Eupl05g01243 662 Pfam Protein of unknown function, DUF547 457 581 IPR006869 -
Eupl05g01243 662 PANTHER EXPRESSED PROTEIN 136 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01243 Eupl-Chr5 35012240 35020640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01243 1 110 C2H2 Transcription Factor Family AT4G21160 28.829 1.29e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01243 - - nnu:104597181 746.888