Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01240 ATGGAGAGACAATTGGAGGTGCCGGCCGCTAAGAAAAACCTTGCGTTCATCGGTGATGGAGCTCAAATGACGAAGATAACCGACAACCGGAGTAATGCTAGCGGTTATAAAACCTATTACTCAACGACACTTGCTATATTTGGATATGGCTTTATGGCACAATATCTGACAATCGAGAACTCGGCCGGGCCAAAAAGTGGGCAAGCAGTGGCGTTAATGAGTGAATCCAATCACTCCACGTTTTACAGATGCATATTTCTAGGGTATCAAGATACCTTGTATGCAAAGCGTTATCTGCAATTTTATAGAGAATGCGATATTCATGGGACGGTTGATTTTATATTTGGAGCAGCTGCTGCAGTTTTTCAAAACTGCAATATTTATGCACGACTTCCGAATACGGAAATTACCATCACTGCCCAAAAATATGATGACTTAAATTCTGATAGTGGGTTCTCGATTCAAAATTGCACTTTAACAGTTCCGCCCGAGTTGGAAAGAATGAAATCAACAGTCAAGGCGTACCTCGGTCGACCCTGGAATGCACACGCGACAACAATTATCATGCAATCTTTTTCTGGATGA 585 0.4222 MERQLEVPAAKKNLAFIGDGAQMTKITDNRSNASGYKTYYSTTLAIFGYGFMAQYLTIENSAGPKSGQAVALMSESNHSTFYRCIFLGYQDTLYAKRYLQFYRECDIHGTVDFIFGAAAAVFQNCNIYARLPNTEITITAQKYDDLNSDSGFSIQNCTLTVPPELERMKSTVKAYLGRPWNAHATTIIMQSFSG* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01240 194 Gene3D - 2 194 IPR012334 -
Eupl05g01240 194 Pfam Pectinesterase 4 192 IPR000070 GO:0030599|GO:0042545
Eupl05g01240 194 ProSitePatterns Pectinesterase signature 2. 107 116 IPR033131 -
Eupl05g01240 194 SUPERFAMILY Pectin lyase-like 4 192 IPR011050 -
Eupl05g01240 194 PANTHER PECTINESTERASE 4 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01240 Eupl-Chr5 34952116 34960300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01240 2 192 Carbohydrate Esterase AT2G26440 46.632 4.65e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01240 K01051 - csv:101212951 216.083