Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01237 ATGCTGGGGAGTCAATCGAGAGAATTCGGTGCGCTTGAGAATGACATGGAGGTGCGAAAGGTCTGTGCGAATGGGCTTTGCATGAAAACCTCTGAGGTTGAAGCAAAGCTCGATGAAGGGAACATTCATGAAGCGGAATCATCATTGCGGGAGGGTTTGTCACTCAATTTTGAGGAAGCTAGGGCCCTTCTTGGAAGGTTGGAGTATCAAAGAGGCAACCTGGAAGGTGCTCTTCGTGTATTCGATGGCATAGATCTCCAGACTGCCATACAGCGGTTGCAACCTTCTCTCACTGAAAAACAACCATCTAGGAAGAGCCGTTTCCGTAGTGAATCAGTGCATACAGTTTCCCAGCATGCTGCTAGCCTGGTGCTTGAAGCCATATACTTGAAAGCCAAGTCTCTTCAAAAGCTTGGGAGAGTAACTGAGGCTGCTCAGGAATGTAAAAGCGTCCTTGATGCTGTGGAGAGGATATTCCAGCATGGCATCCCTAATGTGCTAGTGGACAATAAGTTGCAAGAGACGGTTAGTAAGGCTGTAGAGCTCCTTCCAGAGCTTTGGAAGCAAGCTGGTTGCTATCAGGAAGCCATGTCTGCTTACAGACGCGCTCTCCTTAGCCAGTGGAATCTTGACAACGAATGCTGTGCAAGGATACAGAAGGGGTTTGCATTGTTTTTGCTGTATGGTGGTGTAGAGGCTGGCCCACCCAGTTTAGCTGTTCAGATTGATGGCTCATTTGTGCCGCGAAATAATCTGGAAGAAGCAATTCTATTGTTGATGATTCTTTTAAGGAAATGTTACCTTGGTAAGACCAAATGGGATCCTTCGGTTATGGAGCATTTTACATTTGCACTATCTCTATGTGGCCAGACTTCTGTATTGGCAAGGCAACTCGAAGAAGTCTTACCTGGAATATTTTATCGTTGTGACCGGTGGAACACTTTAGCCCTTAGCTACAGTGCAGCGGGACAAAATAGAGCTGCCTTGAATCTATTGAGGAAGTCCCTGCACGAGCACGAAAAACCAAATGATCTTCTGGCATTGTTATTAGCTTCCAAGATATGTAGTGAGGACTCCCTTCTTGCTTCTGAGGGGGTGGGATATGCCCGGAGGGCAATTGCAAATGCTCAAGGAATGGATGAACATTTAAAGGGTGTAGGTCTTCGCATGCTGGGTCTTTGTTTGGGAAAGCAAGCTAAGGTTGCTTCCTCAGACCTGGAGAGGTCTTACCTCCAGTCAGAAGCTTTGAAATCATTAGATGAGGCAATTTCTTTTCAACGGGACAACCCAGATCTAATTTTTGAGTTGGGGGTTCAATATGCAGAGCACCGGAACTTGAATGCTGCCTTGCGTTGTGCGAAACAGTTCATTGATGCAACAGGGGGGGCCATATTGAAAGGTTGGAGATTGCTTGCTTCAGTTTTGTCTGCGCAACAACGGTATTCAGAGGCGGAAGTGGTTACTGATGCTGCTTTAGATGAGACTGCAAAGTGGGAGCAAGGACCATTGCTCAGAATGAGAGCAAAGCTGAAAATCTCTCAATCATTGCCCATGGATGCAGTGGAAACTTATCGGCTCCTCCTTGCCCTGGTCCAAGCCCAAAGGAAATCTTTTGGGCCTCTCAGAAGGAATATCCCTCAGGTAGAGGATGATAAGGTCAGTGAATTTGAAGTTTGGCAAGGTCTTGCAAGTTTATACTCCAGCCTTTCGTATTGGAAGGATGCTGAGATATGCTTGGAGAAGGCTAGAGCACTGAAACAATACTCTGCTGCTACACTGCACACCGAAGGTGTCATGTATGAAGGACGTGGACAAATCCAGGAAGCATTGGCTGTTTACAGTGATGCTCTTTCGCTGGACCTGAGTCATGTGCCTTGCAAGGTTTCAATTGGTGCTTTGCTGTGGAAGATGGGCTCCAAGTCATTGCCCGTGGCAAGAAGCTTTCTCTCAGATGCATTGAGGTTTGAACCCACCAACCGTTTTGCTTGGTATTACTTAGGAATGGTTCACAGGGATGATGGACGGATAGCTGATGCCTCTGACTGCTTCCAAGCAGCGTCCATGCTTGAAGAGTCGGATCCCATTGAAAGCTTCAGTTCAATCCTTTGA 2109 0.4694 MLGSQSREFGALENDMEVRKVCANGLCMKTSEVEAKLDEGNIHEAESSLREGLSLNFEEARALLGRLEYQRGNLEGALRVFDGIDLQTAIQRLQPSLTEKQPSRKSRFRSESVHTVSQHAASLVLEAIYLKAKSLQKLGRVTEAAQECKSVLDAVERIFQHGIPNVLVDNKLQETVSKAVELLPELWKQAGCYQEAMSAYRRALLSQWNLDNECCARIQKGFALFLLYGGVEAGPPSLAVQIDGSFVPRNNLEEAILLLMILLRKCYLGKTKWDPSVMEHFTFALSLCGQTSVLARQLEEVLPGIFYRCDRWNTLALSYSAAGQNRAALNLLRKSLHEHEKPNDLLALLLASKICSEDSLLASEGVGYARRAIANAQGMDEHLKGVGLRMLGLCLGKQAKVASSDLERSYLQSEALKSLDEAISFQRDNPDLIFELGVQYAEHRNLNAALRCAKQFIDATGGAILKGWRLLASVLSAQQRYSEAEVVTDAALDETAKWEQGPLLRMRAKLKISQSLPMDAVETYRLLLALVQAQRKSFGPLRRNIPQVEDDKVSEFEVWQGLASLYSSLSYWKDAEICLEKARALKQYSAATLHTEGVMYEGRGQIQEALAVYSDALSLDLSHVPCKVSIGALLWKMGSKSLPVARSFLSDALRFEPTNRFAWYYLGMVHRDDGRIADASDCFQAASMLEESDPIESFSSIL* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01237 702 FunFam NPG1 547 696 - -
Eupl05g01237 702 Gene3D Tetratricopeptide repeat domain 544 698 IPR011990 GO:0005515
Eupl05g01237 702 Gene3D Tetratricopeptide repeat domain 32 213 IPR011990 GO:0005515
Eupl05g01237 702 Gene3D Tetratricopeptide repeat domain 249 543 IPR011990 GO:0005515
Eupl05g01237 702 ProSiteProfiles TPR repeat profile. 590 623 IPR019734 GO:0005515
Eupl05g01237 702 SMART tpr_5 465 498 IPR019734 GO:0005515
Eupl05g01237 702 SMART tpr_5 660 693 IPR019734 GO:0005515
Eupl05g01237 702 SMART tpr_5 309 342 IPR019734 GO:0005515
Eupl05g01237 702 SMART tpr_5 590 623 IPR019734 GO:0005515
Eupl05g01237 702 SMART tpr_5 125 158 IPR019734 GO:0005515
Eupl05g01237 702 SMART tpr_5 556 589 IPR019734 GO:0005515
Eupl05g01237 702 SUPERFAMILY TPR-like 552 681 IPR011990 GO:0005515
Eupl05g01237 702 SUPERFAMILY TPR-like 59 458 IPR011990 GO:0005515
Eupl05g01237 702 PANTHER PROTEIN NPG1 12 699 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01237 Eupl-Chr5 34922679 34931214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01237 1 702 Calmodulin-binding Proteins AT2G43040 76.028 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01237 K21843 - nnu:104588477 1165.98