Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01230 ATGCACTACTACTCTCAGGACACTCAAAAAATGTATTCGGGTGGAAGCAGTGGCAGTAGTGGCGGCGCCCCTGTCCCTGACCATCCTCCACTTACCGGGCGCCACCCAATTTATCGTGGAGTAAGGCGTAGGAGTGGCGGCAAATGGGTATCTGAAATCCGTGAGCCAAGGAAGCCAAACCGTATATGGTTAGGCACATTTCCCTCTCCGGAAATGGCTGCTGTTGCATATGATGTTGCTGCACTTGCACTCAAAGGTCCCGACGCTGAGCTTAACTTCCCAAACTCAGCTGCGTCTTTACCAGTTCCAGCCTCCACCTCGCCACGCGACATCCAAGCTGCCGCCGCCGCAGCCGCTGCTGCGGCGGGGGCGGCAGCAGATTCTCTATCTGTGGGTGGTGGCATAAACAATCCTGTAATACCAGAAAATCCCCTAGTTTCAAATGAATTCGTGGACGAGGAGCTTATCTTTGACATGCCCAATATTCTTGTGAATATGGCAGAAGGGATGCTGCTTAGCCCTCCTCGTTTGGATGTAACCGGAGACGACTTCGCTCCGGAAAACCCAGGTGATCAGAACCTGTGGAATTATCCTTAA 597 0.5276 MHYYSQDTQKMYSGGSSGSSGGAPVPDHPPLTGRHPIYRGVRRRSGGKWVSEIREPRKPNRIWLGTFPSPEMAAVAYDVAALALKGPDAELNFPNSAASLPVPASTSPRDIQAAAAAAAAAAGAAADSLSVGGGINNPVIPENPLVSNEFVDEELIFDMPNILVNMAEGMLLSPPRLDVTGDDFAPENPGDQNLWNYP* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01230 198 MobiDBLite consensus disorder prediction 1 20 - -
Eupl05g01230 198 PRINTS Ethylene responsive element binding protein signature 76 96 IPR001471 GO:0003700|GO:0006355
Eupl05g01230 198 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Eupl05g01230 198 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 33 197 IPR045277 GO:0003700
Eupl05g01230 198 SUPERFAMILY DNA-binding domain 37 96 IPR016177 GO:0003677
Eupl05g01230 198 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Eupl05g01230 198 CDD AP2 36 96 IPR001471 GO:0003700|GO:0006355
Eupl05g01230 198 FunFam Ethylene-responsive transcription factor 2 36 95 - -
Eupl05g01230 198 Pfam AP2 domain 36 86 IPR001471 GO:0003700|GO:0006355
Eupl05g01230 198 Gene3D AP2/ERF domain 37 96 IPR036955 GO:0003700|GO:0006355
Eupl05g01230 198 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Eupl05g01230 198 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01230 Eupl-Chr5 34857029 34857625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01230 33 198 AP2-EREBP Transcription Factor Family AT2G36450 60.571 6.10e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Eupl05g01230 AP2 2.3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01230 - - vvi:100261339 249.21