Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01214 ATGGACTCCCATCTGAAGCAATGGAGAAACCAGCATCAGTCAGAGCTACCACCATCTGCAAAGATCCCAAGACTCCTCCTTGACACACCCCATCAACAACCATCTGGGTCTGCTCTTCCCTTGTTTGTACCTGAACCCAACACCAGGATCAGCAACCTGTCAGCATTTCCAGATTCTACTACCACTACTTCCAGATTTTCCAGGGTGGGAGGTTTCTTCAGCTTAGCTCAGTGGCAGGAGCTTGAACTGCAGGCTTTGATCTTCAAGTGTATGTTGTCTGGGGCTGCTGTTCCTGCTGAACTCATTCAGCCCATCAAGAAAAGCCTTCTCAATGCTTCTACTCCATGTTTTCTCCATCACCCTCAACAATATCAGTATTATCAACCAGCTATGTTGCAGTCGGGATACTGGGGGAGAAGTGTTGTGGACCCAGAGCCTGGTAGATGCCGGAGAACCGATGGGAAGAAGTGGAGGTGCTCGAGGGATGTGGTGGCTGGCCAGAAGTACTGTGAACGCCACATTCACCGAGGCCGAAACCGTTCAAGAAAGCCTGTGGAAATCCCCACAACCACCGCAGCTGGTAATGGCCTGAAAACCACAACTCCTATAGCTGCTTCGCCCTTAACAGCCGTGGCTAGTGGGACCCATTTCTCCATCTCGGGGTTGTCACCTTCTATCGATATCCTTCACCTCAACCAAAGGGAGAGTAAACCTGGAATAGTAGGGGGGCTTCTGGAGAACCACCATAAGAAAGTTTCTAATGAAGGCAGACCTGATGGCCGGATCCTCCGGCATTTCTTTGATGACTGGCCAACATCGCAACAAGAGCATAATGGTGTTGGCAGCAATGCAAGTGCAGGGACTTCCACCACCTGCCTCTCCATCTCCGTTCCAGGGGACCACCACCGATCTTCGGATTTCTCCTTGAAACTATCGACGGGTGATGGGGATGGACAAGGTTCTCGAGAAGGGAACGTAGGAGAGGAGCGGCCCCAGCTGAATTGGGGAGCAGGATGGGGGACCCATCAGGTAAGTTCGATGGGGGGCCCACTTGCTGAGGCACTGCGATCATCAACACCGACGAGCGTCCTGCATGAATTGCAACGTGGGTCTGGGTCTGAGACTAGTAGTGTTTGCACCTGA 1143 0.5223 MDSHLKQWRNQHQSELPPSAKIPRLLLDTPHQQPSGSALPLFVPEPNTRISNLSAFPDSTTTTSRFSRVGGFFSLAQWQELELQALIFKCMLSGAAVPAELIQPIKKSLLNASTPCFLHHPQQYQYYQPAMLQSGYWGRSVVDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHIHRGRNRSRKPVEIPTTTAAGNGLKTTTPIAASPLTAVASGTHFSISGLSPSIDILHLNQRESKPGIVGGLLENHHKKVSNEGRPDGRILRHFFDDWPTSQQEHNGVGSNASAGTSTTCLSISVPGDHHRSSDFSLKLSTGDGDGQGSREGNVGEERPQLNWGAGWGTHQVSSMGGPLAEALRSSTPTSVLHELQRGSGSETSSVCT* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01214 380 ProSiteProfiles WRC domain profile. 143 187 IPR014977 -
Eupl05g01214 380 SMART QLQ_2 71 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl05g01214 380 MobiDBLite consensus disorder prediction 273 332 - -
Eupl05g01214 380 Pfam WRC 144 186 IPR014977 -
Eupl05g01214 380 Pfam QLQ 73 105 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl05g01214 380 ProSiteProfiles QLQ domain profile. 72 107 IPR014978 GO:0005524|GO:0005634|GO:0006355
Eupl05g01214 380 MobiDBLite consensus disorder prediction 273 298 - -
Eupl05g01214 380 MobiDBLite consensus disorder prediction 357 380 - -
Eupl05g01214 380 PANTHER GROWTH-REGULATING FACTOR 5 55 302 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01214 Eupl-Chr5 34691031 34694190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01214 1 367 GRF Transcription Factor Family AT3G52910 47.927 2.20e-86 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Eupl05g01214 WRC 4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01214 - - nnu:104587868 556.214