LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl05g01208	ATGGCTTCTACCCCTTCAACAGAGACTAAGCCCTTCTCGGTTCTCTTTGTCTGCCTCGGCAACATCTGCAGAAGCCCCGCTGCTGAGGGCGTCTTCACAGAGATCGTCAAGCGAAGAGGCATCGAATCCAAGTTCAAGATTGACTCTGCCGGCACTATCGACTATCACGAGGGTAATCCAGCAGACCCACGAATGAGGGCTACCTCTAAGAGGCGTGGGATTGAGATAACTTCCATCTCAAGGCCGATACGACCGTCTGATTTTAGAGATTTTGATCTCATTCTCGCAATGGACATGCAAAACAGAGATGATATCTTGGGGGCATTTGAGAGGTGGAGTTTCAAGGAGCCTCTCCCTGCAGATGCCCATAAAAAGGTTAGGTTAATGTGCTCATATTGTAAGAAACACGATGAGACTGAAGTTCCAGATCCTTATTACGGGGGACCACAAGGTTTCGAGAAGGTTTTGGATTTACTCGAGGATGGTTGCGACTCATTACTAGACAGCATCCTGGTAGAGAACCCTCATATCTTAGAGTCATAG	543	0.4788	MASTPSTETKPFSVLFVCLGNICRSPAAEGVFTEIVKRRGIESKFKIDSAGTIDYHEGNPADPRMRATSKRRGIEITSISRPIRPSDFRDFDLILAMDMQNRDDILGAFERWSFKEPLPADAHKKVRLMCSYCKKHDETEVPDPYYGGPQGFEKVLDLLEDGCDSLLDSILVENPHILES*	181

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl05g01208	180	SMART	LMWPc_2	12	169	IPR023485	-
	Eupl05g01208	180	Pfam	Low molecular weight phosphotyrosine protein phosphatase	14	167	IPR023485	-
	Eupl05g01208	180	Gene3D	-	1	173	-	-
	Eupl05g01208	180	CDD	LMWPTP	13	168	-	-
	Eupl05g01208	180	PANTHER	LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED	3	174	-	-
	Eupl05g01208	180	PRINTS	LMW phosphotyrosine protein phosphatase signature	141	156	IPR017867	GO:0004725\|GO:0006470
	Eupl05g01208	180	PRINTS	LMW phosphotyrosine protein phosphatase signature	14	31	IPR017867	GO:0004725\|GO:0006470
	Eupl05g01208	180	PRINTS	LMW phosphotyrosine protein phosphatase signature	57	73	IPR017867	GO:0004725\|GO:0006470
	Eupl05g01208	180	FunFam	Low molecular weight protein-tyrosine-phosphatase	11	174	-	-
	Eupl05g01208	180	SUPERFAMILY	Phosphotyrosine protein phosphatases I	10	170	IPR036196	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl05g01208	4	174	Protein tyrosine phosphatase (PTP) family	AT3G44620	65.464	3.81e-88	257

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl05g01208	K25307		K01104	vvi:100253402	320.472

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