Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01206 ATGCAACCATGTCTCGACGACCTCGCCGATGATCTCCAGAGCATGAGCTTCAACTCCACCACCACCACCGACATCAACCGCAGCACCAGCTCCGGCTCCGAGACAACCTGGACCGCCTCGAGCCTCTGCTCCATCTCCATCAAACCCCACGCCTCCTCAGGCGACCCCTGCTGGGACGGAATCAGACGAGTCAGATCGGAATCGGCGAATGGCGGACTCGGACTCAGCGACTTGCGATTCGTTCAGAGATTGGGGAGCGGTGATATCGGGAGCGTATACTTAGCGGAGCTAAAAGGCGCCCCGGAGTGTACGTTTGCGGCAAAGATAATGGATAAGAAGGAGCTCGCGAGTCGTAACAAAGAAGGAAGGGCAAGGACAGAGAGGGAAATATTAGAGATGTTGGATCATCCATTTTTGCCCATGCTTTATGCGAGCTTGGAGTCAGCGAAGTGGTCCTGTTTGTTAACTGAGTTCTGTCCCGGCGGCGATTTGCACGTTCTCCGGCAGCGCCAGCCGGGGAAACGGTTCGACGAGGCGGCCGTCAGGTTTTACGCATCGGAAGTGGTGGTGGCTCTAGAGTACGTCCACATGATGGGGATCGTCTACCGGGATCTAAAGCCCGAAAACGTGCTCGTGAGAACAGATGGTCACATCATGCTGACCGATTTTGACCTCTCTCTAAAATGTGACAATTCCACATCAACGGCTCAGCTTGTTTCTGATCAAAACCCTTCTGGCTCCGCCCCATCTAGTGATTACCCCGTTGATCCACCTCCATTTACCTCTGCCTCGTGCATTCTTCCCAATTGTATCGTCCCGGCAGTCTCGTGCTTTCACCTAAAGCGCAAACGCAAGAAGAAACTGGGCCATCGTGGTGGGCCTGAATTCGTAGCGGAGCCCGTTGATGTGCGATCGATGTCGTTCGTAGGAACACATGAATATTTGGCACCCGAAATCGTATCGGGCGAGGGCCACGGGAGTGCGGTGGATTGGTGGACGCTTGGGATATTCATATACGAACTCTTGTACGGCGTGACACCCTTCAAGGGAATGGACAATGAGTTAACTATGGCTAATATTGTTGCACGAGCACTAGAATTCCCTAAGGAACCATCTCTAGCGGCACCCGCAAGGGACCTCATCACACAATTGTTGGTTAAGGATCCTGCGAGACGAATGGGGTCCACCATGGGTGCTACTGCAATCAAGCAACACCCTTTCTTCCAGGGTGTCAATTGGGCTTTGTTGAGGTGTACACCACCTCCATACATTCCGCCACCGTTCACTAGTCGGGATGTCTCCGACGATAGTTGCCCCGACACTCCAGTGGAGTATTACTAG 1341 0.5354 MQPCLDDLADDLQSMSFNSTTTTDINRSTSSGSETTWTASSLCSISIKPHASSGDPCWDGIRRVRSESANGGLGLSDLRFVQRLGSGDIGSVYLAELKGAPECTFAAKIMDKKELASRNKEGRARTEREILEMLDHPFLPMLYASLESAKWSCLLTEFCPGGDLHVLRQRQPGKRFDEAAVRFYASEVVVALEYVHMMGIVYRDLKPENVLVRTDGHIMLTDFDLSLKCDNSTSTAQLVSDQNPSGSAPSSDYPVDPPPFTSASCILPNCIVPAVSCFHLKRKRKKKLGHRGGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIYELLYGVTPFKGMDNELTMANIVARALEFPKEPSLAAPARDLITQLLVKDPARRMGSTMGATAIKQHPFFQGVNWALLRCTPPPYIPPPFTSRDVSDDSCPDTPVEYY* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01206 446 MobiDBLite consensus disorder prediction 427 446 - -
Eupl05g01206 446 ProSiteProfiles AGC-kinase C-terminal domain profile. 409 446 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl05g01206 446 Gene3D Phosphorylase Kinase; domain 1 77 162 - -
Eupl05g01206 446 Pfam Protein kinase domain 305 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01206 446 Pfam Protein kinase domain 80 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01206 446 FunFam serine/threonine-protein kinase D6PK-like 163 230 - -
Eupl05g01206 446 CDD STKc_phototropin_like 76 419 - -
Eupl05g01206 446 Gene3D Transferase(Phosphotransferase) domain 1 304 426 - -
Eupl05g01206 446 SUPERFAMILY Protein kinase-like (PK-like) 72 435 IPR011009 -
Eupl05g01206 446 FunFam serine/threonine-protein kinase D6PKL2 77 162 - -
Eupl05g01206 446 FunFam serine/threonine-protein kinase D6PK-like 303 426 - -
Eupl05g01206 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Eupl05g01206 446 SMART serkin_6 78 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl05g01206 446 PANTHER FLIPPASE KINASE 1-RELATED 22 428 - -
Eupl05g01206 446 Gene3D Transferase(Phosphotransferase) domain 1 163 239 - -
Eupl05g01206 446 ProSiteProfiles Protein kinase domain profile. 78 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01206 Eupl-Chr5 34482127 34485402 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01206 1 446 AGC Kinase Gene Family AT3G44610 65.652 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Eupl05g01206 Pkinase 1.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01206 K08286 - nnu:104586920 786.949