Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl05g01203 ATGAAGGTTATCGCTGCGTACTTGCTAGCTGTGTTGGGAGGGAAAACCCAGCCTTCGGCTGATGATCTGAAGGATATCCTCGGATCAGTTGGAGCTGATGCCGAAGAAGATAGGATTGAGCTACTCCTGTCCCAAGTTAAGGGTAAAGATATAACCGAGCTTATTGCATGCGGAAGGGAGAAGTTGGCATCAGTGCCATCTGGTGGTGGTGCCCCTGTTGCAGTTGCCGCGGCTGGCGGTGGTGGTGCTGCTGCTGCAGCACCTGCTGCGGCCGAGTCGAAGAAAGAGGAGAAAGTCGAAGAGAAAGAGGAATCAGATGATGATATGGGTTTTAGTCTCTTTGACTGA 348 0.5172 MKVIAAYLLAVLGGKTQPSADDLKDILGSVGADAEEDRIELLLSQVKGKDITELIACGREKLASVPSGGGAPVAVAAAGGGGAAAAAPAAAESKKEEKVEEKEESDDDMGFSLFD* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl05g01203 115 MobiDBLite consensus disorder prediction 86 115 - -
Eupl05g01203 115 FunFam 60S acidic ribosomal protein P2 1 59 - -
Eupl05g01203 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Eupl05g01203 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Eupl05g01203 115 Pfam 60s Acidic ribosomal protein 17 114 - -
Eupl05g01203 115 Gene3D - 1 58 IPR038716 -
Eupl05g01203 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl05g01203 Eupl-Chr5 34435288 34439157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl05g01203 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 64.348 3.35e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl05g01203 K02943 - sind:105171055 133.65